Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi432g00039 ATGCCGTCAACCCTCAGCCTCGCCGCTCTTCCCGTCGGCCAGACACTCCGCTTCTCTGAAGACTGCTTTTCCTCCGCCAGGTTTCTCCGGCAGCCGACTTCTGAGTGTGCTAACCACCGCCGGACCTCGATCCGCGCCGTTGCGGCGGAGGTGATCGAGATGCGGCGGCCGGCGTCGAGCCTCTACGAGGTGCTGCGAGTGGAGAAAAACGCATCGCCGAGGGAGATCAAGTCTGCTTACCGGAGCCTTGCGAAGCTCTACCATCCCGACGCGGTGGTGCGTCGTTCGCCGGAGTATGACGGTGGAGACTTCATCCAGATCCGAAACGCATACGAGACGCTGTCGGATCCATCAGCGAGGGCGATGTACGACCTGTCGCTGGCGGCGGCGCACGGCGGAAGGCACCGCCGGTTTCCTTCTCCACTGAGCAAGAATCGTTATTCTGGGTTTTACTCGAGCCGGAGATGGGAAACAGACCAATGCTGGTAG 489 0.6155 MPSTLSLAALPVGQTLRFSEDCFSSARFLRQPTSECANHRRTSIRAVAAEVIEMRRPASSLYEVLRVEKNASPREIKSAYRSLAKLYHPDAVVRRSPEYDGGDFIQIRNAYETLSDPSARAMYDLSLAAAHGGRHRRFPSPLSKNRYSGFYSSRRWETDQCW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi432g00039 162 SMART dnaj_3 59 119 IPR001623 -
Sebi432g00039 162 SUPERFAMILY Chaperone J-domain 58 136 IPR036869 -
Sebi432g00039 162 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Sebi432g00039 162 CDD DnaJ 62 116 IPR001623 -
Sebi432g00039 162 PRINTS DnaJ domain signature 99 119 IPR001623 -
Sebi432g00039 162 PRINTS DnaJ domain signature 62 80 IPR001623 -
Sebi432g00039 162 PRINTS DnaJ domain signature 80 95 IPR001623 -
Sebi432g00039 162 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 9 162 - -
Sebi432g00039 162 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Sebi432g00039 162 Gene3D DnaJ domain 47 145 IPR036869 -
Sebi432g00039 162 Pfam DnaJ domain 61 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi432g00039 Sebi-Chr432 768166 768654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi432g00039 62 124 C2H2 Transcription Factor Family AT1G74250 45.455 1.55e-09 53.9