Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi432g00029 ATGGCTGGTGGGTACGATCACGTTGCCAACATTTTTCCTGGGAGGCAAAATTGGAGGTTGAGAGTGAGAGTGGTCCGTTTATGGAACATGTTTCCCATTGATGAACCATCCAGAACATTTTCTATTGAGATGGTTTTGGTTGATGAAATGGGGGAGAGGATTCAAGCTTCTATCAGAAAACCAATGATTAAGAAGTTTGGGTGTAGTGTCATTGAAGGGGAAGCTTACAAGATGCATTTCTTTGGTATAGTTCGCAATCTTGGATCATACAGGGCTACCAAACATGAGTACAAACTCATTTTCCATGCCAAAACCAAAATAAGTAGGTGCGAAGCTTCCAGTCTTCCTTTACACGGGATCTGCCCCATGAATTCTGAGGATATTATGAGAACAAATGGGCAAAGTGATTACCTCGTGGATGTGGTTGGAGTTTTGACTGCTATATCTGCGGAGAAACGTTCTTTCCGCGATGGACGCATGACAAGGGTGATGCAGATGGAACTGACTGACGACAAGGGAAAGGTCCAGTGCGCAATGTTTGGGAGTTATGTTGATATGGTTGGCGACCTTTTAACTGGTATGGGTCCCGAGTTACCTGTTATGGTCGTCATGTTTGCTAAGGTCAAGCTATACAAAGGTATTGTTGTGTTACAGAACGTGTTAAACACTACAAAGATTCTATGCAACCCTAATATTGCTGAAGTTGAGGAATTTCGCAATTTATGCGATAATTCCAGGGTTGCTAGGCACGATATTGACATTTTGGCACCTCTGGGTGTCATTGTGGATGATTATCAAGGCACTCCCCCCAAGGACGAGTTCTTGCATGCACACCCACGGAAGTCTATCAAACAATTGCATGAGACCGAGGAGGTGAACAGAACCTTTCCATGGGGAAATTATTTTTACATATGA 915 0.4339 MAGGYDHVANIFPGRQNWRLRVRVVRLWNMFPIDEPSRTFSIEMVLVDEMGERIQASIRKPMIKKFGCSVIEGEAYKMHFFGIVRNLGSYRATKHEYKLIFHAKTKISRCEASSLPLHGICPMNSEDIMRTNGQSDYLVDVVGVLTAISAEKRSFRDGRMTRVMQMELTDDKGKVQCAMFGSYVDMVGDLLTGMGPELPVMVVMFAKVKLYKGIVVLQNVLNTTKILCNPNIAEVEEFRNLCDNSRVARHDIDILAPLGVIVDDYQGTPPKDEFLHAHPRKSIKQLHETEEVNRTFPWGNYFYI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi432g00029 304 SUPERFAMILY Nucleic acid-binding proteins 127 245 IPR012340 -
Sebi432g00029 304 Gene3D - 115 249 IPR012340 -
Sebi432g00029 304 CDD RPA1_DBD_A_like 19 107 - -
Sebi432g00029 304 Pfam Domain of unknown function DUF223 43 112 IPR003871 -
Sebi432g00029 304 CDD RPA1_DBD_B_like 140 243 - -
Sebi432g00029 304 Gene3D - 5 110 IPR012340 -
Sebi432g00029 304 SUPERFAMILY Nucleic acid-binding proteins 5 111 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi432g00029 Sebi-Chr432 528850 530362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi432g00029 8 243 Core DNA Replication Machinery Family AT2G06510 22.267 2.25e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi432g00029 - - lja:Lj6g3v0884310.1 242.276