Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi432g00026 ATGTGGTCCCCACATGGAGGCCACGCGTTTTGCGGATTTCTGCTGGTCAAGTGCGTGTCACGTGGGCCACCATTTTCTTTGTCTGGGAAGGGCCCTGATAACCTCACCTACCCCTTCACACTTCACTCCGGTTACCCTCGCTGTCTCTCTACACCGTTCCGCCACTCCGCCACCGCAACACCCGGTAACCCCTCCTGTCCACGTGTCTCAACTTCAGAACCTTCTGGACCCACAGGCAGATTAGCCCCTCTGAATTTTCTGTCAGAATCTGAGGACCCAAAAGCTAGGGTTTTTTTTGTGCTTCCCCGGGGATCTGAAGACATGCAGTCCAAGTCTGAAAACGGCAAATCGACTGAGGTCGGATCCTCATTCCTTCAACCTACCGGTGTTTATGCTGAACCTTGGTGGCGTGGTATTGGGTACAACCCCATGGCTCAAGCAATGTCTGGGGCAAATGCATCCATTCATCCTCCCTTGAATGCCCTAATGGGATATGCTCCTTTTATAGGAATTCCTCATGCCAGAATGCTCTTTGCCCTTGAGATGGCTCAAGAACCTGTTTATGTGAATGCCAAACAATACCAAGGAATTCTGAGGCGAAGACAGGCTCGTGCTAAAGCAGAGCTTGAAAAGAAGCTAATAAAGTCTAGAAAGGGCTATGCTAACATCTTATCTGCACAGCCATATCTTCATGAATCTCGGCATCAGCATGCTATGAGAAGGGCAAGAGGCACTGGGGGACGTTTTGCAAAGAAAAATGAAGGTGAGGCCTCAAACAACTCAGGCAAAGAAAAGGATAATGGTTCAGGTCCTGTTCTGTCATCACAATCAATTAGTTCATCTGGTTCTGAACCTTTACCTTCTGACTCTGCTGAAACCTGGAATTCTCCCAACATGCAACAAGATGCAAGAGGATCAAAAGTGAAAGAGTGGAAGAAGGGGACTGCTCAGGCCAGCAAAGGGGAAGCATCTCTTCAAATGAGGCATCACAGAGGCGCCTTGCTATTCAGTAGACCCCTGGATGGGGGATAG 1032 0.4922 MWSPHGGHAFCGFLLVKCVSRGPPFSLSGKGPDNLTYPFTLHSGYPRCLSTPFRHSATATPGNPSCPRVSTSEPSGPTGRLAPLNFLSESEDPKARVFFVLPRGSEDMQSKSENGKSTEVGSSFLQPTGVYAEPWWRGIGYNPMAQAMSGANASIHPPLNALMGYAPFIGIPHARMLFALEMAQEPVYVNAKQYQGILRRRQARAKAELEKKLIKSRKGYANILSAQPYLHESRHQHAMRRARGTGGRFAKKNEGEASNNSGKEKDNGSGPVLSSQSISSSGSEPLPSDSAETWNSPNMQQDARGSKVKEWKKGTAQASKGEASLQMRHHRGALLFSRPLDGG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi432g00026 343 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 118 306 IPR001289 GO:0003700|GO:0006355
Sebi432g00026 343 MobiDBLite consensus disorder prediction 56 78 - -
Sebi432g00026 343 MobiDBLite consensus disorder prediction 262 303 - -
Sebi432g00026 343 ProSitePatterns NF-YA/HAP2 subunit signature. 188 208 IPR018362 GO:0003677|GO:0016602
Sebi432g00026 343 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 185 249 IPR001289 GO:0003700|GO:0006355
Sebi432g00026 343 MobiDBLite consensus disorder prediction 231 343 - -
Sebi432g00026 343 SMART cbf3 182 252 IPR001289 GO:0003700|GO:0006355
Sebi432g00026 343 MobiDBLite consensus disorder prediction 56 86 - -
Sebi432g00026 343 Gene3D - 183 254 - -
Sebi432g00026 343 ProSiteProfiles NF-YA/HAP2 family profile. 183 252 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi432g00026 Sebi-Chr432 483375 488290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi432g00026 131 295 CCAAT-HAP2 Transcription Factor Family AT3G20910 55.152 6.51e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Sebi432g00026 CBFB_NFYA 3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi432g00026 K08064 - gmx:100808378 223.787