Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi432g00013 ATGAAGGAATTTGGCATCTCCAAAGCTAAATTAACGGAAACAGTAGAGGACCTTCTGAAGGTTTATTGTAATAACTGGAAGTTCATTGAGGATGATAACTATAGAGTTCTAATGGATGCTATTTTAGAGAGGAAAGATGAAGATAAGGAAGTAGAATCTCAAAAAGAAGCTCAGATCCATGATGATCCTTTAATAAGCGAACCTCTAAAGAAGAGATTGAGGCCAAGAACCAGAAGGGACAGATTGCAAGTCTGTGAACATTTAGTTAAAAGAAAATCTGCAAGAGACAAGAAGCAGATTGTGGTTTATGAGAATAGTATATATCATGGAGATGATTTTTGTTCCTGGTCCGCAGAAAATTCATTGAGGGGACAAGAAAATGGATTTTTATTTGAAGACTGCATTCCCTTTGGTGAAGCATATGAAGAGGTGCCTCTCAAATCATTAAATCCAGCTGCTCCCACTGGTACTAGCTCTGATGTCATGGAAGAGGAGACAAAGTTTCTACAATTTGAACATTTAAATGTGGACAATAAAGGCAGCTGTGATTCAAGTAGATTGCAATTTGATATTGCTTCTTCATCCAAAGGAGATGTGAGTGTTTCTATAATCTGTAACTCCTCTCAATCTGATTATCATATCCCAAGTTTGGATGCAGTTCTTAAAGCTGTGGAAGAGAAATATAAATTGCACAAAAGTTTGGATTCAGATTTCTCTGTGATGAAGCTGATGAGAGATGTCTGTGAGTGTTTCTTGGCAATGGCTATCTCATCCTCTGTTGATAGGGGTTTGTGGATTAATAATGTGTCCCTGTCAAAGGAATGTGATAGTTCAAAAGATTATGGAAACAATTTTTCCGTTCATCTAGGCTATTCAAATTATTTTGCCAATTTTCATAATCTTGTCAAGATAGTACCTCAGATTCCAAAGTCTGTAACTTTAAGTGGACTAGAAGGTCTTCATTACATTTGTGGCTTCAGGATACCAGATATTTTAGACACTCCAAGTCAAAGGGAAAGAAGGATAAAATTTCTGGAGCACACAGAGTTCACAAATTCAAATGTTGTGGCTGGCATTGAAAAGGACTGCTCTTCTGCTGCGGAGTGTTGTTATATTGATGACATAACTAGAGGAGAAGAAAAGCAAGGCATCACTACAGATCTTCAGGTGTTTCGTACACCAGAGGGGAAGGGTTGGGGAATCCGAACACTTAAAGATTTGCCAAAGGGTGCCTTTGTTTGTGAGTTTGCTGGGGAAGTAGTAACCAACTTAGAACTACGTAAGCGAATTGTGCAAAGCATTGGTGAAGAGAAGCACACATATACAGTACTTCTTGATGCAGATTGGTGTTCAGAGAATATCCTGAAGGATGAAGAGACCCTCTGTTTAGATGCAACATTATATGGAAATGTTTCTCGATTTATCAATCACAGATGGACTGATGCAAGCTTACTTGAGATCCCAGTTGAAGTGGAGACACCAGATCATCACTATTATCACCTTGCTTTTTTCACAACAAGGAAAGTTTCTGCCATGGAAGAACTGACTTGGGACTATGGCATTGACTTCAATGACCAAGATCATCCTGTGAAGGCTTTCAGATGCCTTTGTAACAGTCCATTGTGCCGTGACCAGAGACAGAAAAATGATTGCACAAAGATACAGTTGTTCTCTGCAAACTTATTAGAACTGAATACCAGGTGA 1704 0.3862 MKEFGISKAKLTETVEDLLKVYCNNWKFIEDDNYRVLMDAILERKDEDKEVESQKEAQIHDDPLISEPLKKRLRPRTRRDRLQVCEHLVKRKSARDKKQIVVYENSIYHGDDFCSWSAENSLRGQENGFLFEDCIPFGEAYEEVPLKSLNPAAPTGTSSDVMEEETKFLQFEHLNVDNKGSCDSSRLQFDIASSSKGDVSVSIICNSSQSDYHIPSLDAVLKAVEEKYKLHKSLDSDFSVMKLMRDVCECFLAMAISSSVDRGLWINNVSLSKECDSSKDYGNNFSVHLGYSNYFANFHNLVKIVPQIPKSVTLSGLEGLHYICGFRIPDILDTPSQRERRIKFLEHTEFTNSNVVAGIEKDCSSAAECCYIDDITRGEEKQGITTDLQVFRTPEGKGWGIRTLKDLPKGAFVCEFAGEVVTNLELRKRIVQSIGEEKHTYTVLLDADWCSENILKDEETLCLDATLYGNVSRFINHRWTDASLLEIPVEVETPDHHYYHLAFFTTRKVSAMEELTWDYGIDFNDQDHPVKAFRCLCNSPLCRDQRQKNDCTKIQLFSANLLELNTR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi432g00013 567 Pfam Ubiquitin-binding WIYLD domain 1 47 IPR018848 -
Sebi432g00013 567 Gene3D SET domain 332 545 IPR046341 -
Sebi432g00013 567 Gene3D - 1 47 IPR043017 -
Sebi432g00013 567 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 382 551 - -
Sebi432g00013 567 SMART set_7 386 526 IPR001214 GO:0005515
Sebi432g00013 567 Pfam SET domain 398 520 IPR001214 GO:0005515
Sebi432g00013 567 ProSiteProfiles SET domain profile. 386 520 IPR001214 GO:0005515
Sebi432g00013 567 SUPERFAMILY SET domain 380 543 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi432g00013 Sebi-Chr432 334780 339716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi432g00013 381 543 C2H2 Transcription Factor Family AT2G23740 36.310 3.77e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi432g00013 SET 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi432g00013 - - psat:127094085 287.73