Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi431g00077 ATGGACGCTTCAAGTGGAAGTTCTGGTGATTCTGGTGATAAGCGAGACAGGAATCAAAGTTCCAGTGAGGGAAACCCATCCTTCCATTTCACTCCTCATCACTTAGCTCAACTTGAAGCATATTTGAAGCTATGCCCACATCCAGATGAAACCCAACTTCATATATTAGCAAGAGACCTAGGGCTTGAGCCAGAACAGATTTATCATTGGTTTCAGACCAAAATCCAGGGAGATCATGAGGGGTCTGAATCTGAGCTAGAGTCTCCAAGCACAGAAATTTCTAGGAAGAAGGAAAGAAGACAAATGTCAGAGATTGCAGATGCTGCTATAAGCGAACTCCTTAAACTCATGACTACCGATAAGCCCCTTTGGACCAAATCCTATGATATTGTTGGCTTTGTTCTCGTTCCTGAAAGCTATGCCAACTTGTTTCTTGAGGCTATTAACTTGGCAAGTCCAAACATTCATCAAGAATCTTCCAAAGATTCAATAGTAGTAAAGCTTGGTGCGATGCAATTGATTGAAATGTTTTTAGATTCGATGTATGGAGAAACTCACGTTCTTTCACCTTTAGTGCCATCTCGGGAATTTGTCTTCCTTCGCTCTTGTGAACAAGTTGGGGATGGTTTATGGTTGATAACTGATGTGTCTGTTGATAATGCGTCTCTTGATAACAACTATGAAGGCCAAATCCCTGATTCTCCTCTTCGAAAGTGGCTGTTTGGTCTTTACAAAATGTGTGAGAAAATTGCTTGCACTTCAATTCAGTATCTGCCAGCTCATAGAGAGATCTCTTCACCCAAAGGAAGAGAGGTCGTAATAAACCTCTCTAACCGAATGGTTCAGAACTTCTGCAAAGTATTGAACCTAAGAGATCATCCGCATTTCACGAGCTTTCATGTGGGCAATAGAAATGAACTTTTTGTGAGTTTTCATAAGAACATACCATCACTCCAACCAGAAGGCTTCATAGGCACAACTATGCTTTCAATTTCGCTTCCTCTGCTTCCACAGAATGTATTTTACTATCTCAAGCATCTGTATCCACGACCTCGGTGGGATGTTCTTTCCGTTGGGAATCCACTGGAGGAGATCGCTCATATACCAATCAGCGATACCAGTCGTATTTCAGTTATTAAGACCTTCAACCGTGATGACAACAATTTGCTGGTATTTCAAGAGAGTAGTATAGATCATTTGGGAGCGTATGTTGTGTTTGCTCCACTGGATGAAGCAATTGGGGAAATTGTGATGAATGGAGAGTCTACGAATGTGGCAGTGCTTCCGTCAGGGTTTATGATCAGTGGGGACAATCGTGCAGTTGCTGAGAGTAGAAATCCTCATAGATCAGGAGGAACGTTGTTGACTACCTGTTACCAAGTACTGGTTTGTGATGACTCACTGACCCTGGAAATGAAAGTTGAAGCTATGAAGTCTCTCATTGGACTCATCATCTCAACAATCCAAAAGGTTACCCTTGTCCTCGAGTGTCCCAATTGTTGGTTACGAGTGCACTTTTGCTAA 1524 0.4213 MDASSGSSGDSGDKRDRNQSSSEGNPSFHFTPHHLAQLEAYLKLCPHPDETQLHILARDLGLEPEQIYHWFQTKIQGDHEGSESELESPSTEISRKKERRQMSEIADAAISELLKLMTTDKPLWTKSYDIVGFVLVPESYANLFLEAINLASPNIHQESSKDSIVVKLGAMQLIEMFLDSMYGETHVLSPLVPSREFVFLRSCEQVGDGLWLITDVSVDNASLDNNYEGQIPDSPLRKWLFGLYKMCEKIACTSIQYLPAHREISSPKGREVVINLSNRMVQNFCKVLNLRDHPHFTSFHVGNRNELFVSFHKNIPSLQPEGFIGTTMLSISLPLLPQNVFYYLKHLYPRPRWDVLSVGNPLEEIAHIPISDTSRISVIKTFNRDDNNLLVFQESSIDHLGAYVVFAPLDEAIGEIVMNGESTNVAVLPSGFMISGDNRAVAESRNPHRSGGTLLTTCYQVLVCDDSLTLEMKVEAMKSLIGLIISTIQKVTLVLECPNCWLRVHFC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi431g00077 507 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 89 180 IPR042160 -
Sebi431g00077 507 ProSiteProfiles 'Homeobox' domain profile. 21 74 IPR001356 GO:0003677
Sebi431g00077 507 CDD homeodomain 30 72 IPR001356 GO:0003677
Sebi431g00077 507 ProSiteProfiles START domain profile. 95 219 IPR002913 GO:0008289
Sebi431g00077 507 SMART HOX_1 23 85 IPR001356 GO:0003677
Sebi431g00077 507 SUPERFAMILY Homeodomain-like 25 73 IPR009057 -
Sebi431g00077 507 Gene3D - 10 115 - -
Sebi431g00077 507 Pfam Homeodomain 30 72 IPR001356 GO:0003677
Sebi431g00077 507 MobiDBLite consensus disorder prediction 1 30 - -
Sebi431g00077 507 MobiDBLite consensus disorder prediction 78 98 - -
Sebi431g00077 507 Pfam START domain 178 222 IPR002913 GO:0008289
Sebi431g00077 507 SUPERFAMILY Bet v1-like 97 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi431g00077 Sebi-Chr431 917223 919895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi431g00077 2 74 Homeobox Transcription Factor Family AT3G61150 37.838 1.95e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi431g00077 START 1e-08 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi431g00077 K09338 - aprc:113852280 348.977