Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi431g00064 ATGGCCTCAAACTCCATGGCTGGCTTGATCACTGGCTCTCATTCTCATTTCTCACATGACTCTGATGAGCATAAGCCTCCTACACGTCAATCTTCATCAAAAACATGTCGAGTTTGTGGTGATGAGATTGGATATAAGGAAAATGGGGAGCTGTTTGTGGCTTGTCATGTGTGTGGATTTCCTGTTTGTCGACCTTGTTATGAGTATGAGAGGAGTGAAGGGAACCAATGCTGCCCTCAATGCAACACTCGCTATAAACGTCAAAAAGGTTCTCCTAGAGTGGTTGGAGATGAAGAGGAAAACTTTGATGCTGGTGATTTTGATGATGAATTTCAGATTAAGAATCATCATGATGATCTAGACCAGCATCGTGATGTTAATCATGTGGAAAATGGGGATTATAATCAACAGAAATTGCATCCCAATGGTCAAGCTTTCTCTTCAGCAGGAAGTGTTGCTGGCAAGGATTTTGAAGGGGAGAAAGAATTACACAGTAATGCAGAATGGCAAGAAAGAGTAGAGAAATGGAAAGTCAGGCAAGAAAAGAGAGGTCTACTAAACAAAGAGGATGGAAAAGAAGACCAAGGTGAAGATGATGACTACCTTTTGGCTGAAGCTAGGCAACCATTGTGGCGCAAGGTTCCAATATCTTCAAGCTTAATCAATCCATATCGCATAGTAATTGTCATGAGGCTTGTCATCCTAGCTTTTTTCTTTAGATTCCGTATCTTAACTCCAGCATATGATGCATTTGCCTTGTGGCTTATCTCTGTGATATGTGAAATATGGTTTGCACTGTCATGGATTCTTGATCAGTTCCCTAAGTGGTTCCCCATCACACGTGAAACTTACCTGGACCGTTTGTCCATAAGGTTTGAGCGTGAAGGGGAACCAAACCAACTGGCCCCAGTTGATGTCTTTGTGAGTACTGTGGACCCTTTGAAGGAACCACCCATTATAACAGCAAACACTGTTCTGTCAATCCTTTCTGTTGACTACCCTGTGGAGAAGGTCTGCTGCTATGTATCAGATGATGGTGCATCTATGCTTCTGTTTGATTCATTGGCAGAAACTGCTGAATTTGCAAGAAGATGGGTTCCTTTTTGCAAGAAGTATAGCATAGAGCCAAGGGCTCCTGAGTACTATTTTAATGAGAAGATTGATTACTTGAAGGATAAGGTACATCCTACATTTGTGAAGGAACGAAGGGCTATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATTAATGCTTTGGTGGCAAATGCTCAGAAGAAACCAGAAGAGGGGTGGGTGATGCAGGATGGAACTCCATGGCCTGGGAACAACACCCGTGATCATCCAGGAATGATTCAGGTGTATTTAGGAAGTGCTGGTGCACTAGATGTGGAAGGCAAGGAGTTGCCAAAACTTGTGTATATTTCTCGTGAAAAACGTCCTGGCTATCCACACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCATTCATGTTGAATCTGGATTGTGACCACTACATCAATAATAGCAAGGCTGTAAGAGAGGCTATGTGCTTTTTAATGGATCCCCAGCTTGGGAAGAAGCTCTGTTATGTCCAATTTCCACAAAGATTTGATGGTATTGATCGCCATGATAGATATGCTAATCGCAACACTGTATTCTTTGATATCAATATGAAAGGGCTTGATGGGATTCAAGGTCCAGTTTATGTTGGTACTGGAACTGTGTTCAACAGACAAGCATTATATGGCTATGATCCTCCAGTGTCTGAGAAAAGGCCAAAGATGACATGTGATTGCTGGCCATCATGGTGTTGCTTTTGTTGTGGTGGTAGGAAGTCCAAGTCAAAAAAGAAATCAGGAAAGGGTCTCTTTAGTGGATTGTACAAAAAGAAGAAGAAAATGATGGGGAAAGATTATGTTAGAAAAGGGTCTGGGTCCATGTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGCTATGAAGAATTAGAGAAATCATCCCTCATGTCCCAGAAAAGTTTTGAGAAGCGATTTGGACAGTCACCAGTTTTCATTGCTTCCACTTTGATGGAAAATGGAGGATTTCCTGAAGGAACAAATACTCAATCATTGGTCAAGGAAGCCATTCATGTTATAAGCTGTGGATATGAAGAGAAAACTGAATGGGGCAAAGAGATTGGATGGATTTATGGTTCGGTCACAGAAGATATTTTGACTGGGTTTAAGATGCACTGCAGAGGATGGAAATCAGTATATTGCATGCCAAAGAGAGCAGCTTTCAAGGGATCTGCTCCTATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCTGTTGAGATTTTCCTTAGTCGCCATTGTCCATTGTGGTATGGCTATGGAGGAAAACTGAAGTACCTTGAGAGGCTGGCTTACACTAATACCATTGTTTATCCATTCACTTCCATCCCTCTACTTGCATACTGCACAGTTCCAGCAGTGTGTCTCTTGACTGGAAAGTTCATCATCCCCACTCTGACCAACCTTGCTAGTGTTTGGTTTATGGCTCTATTTATCTCCATCATTTTGACTGGTGTGCTTGAGCTCCGATGGAGTGGAGTTACCATTGAAGACTGGTGGCGCAATGAGCAATTTTGGGTCATTGGAGGTGTTTCTGCACATCTTTTTGCTGTGTTTCAAGGTCTCCTTAAAGTTCTTGCTGGAGTAGACACCAATTTTACTGTCACAGCAAAAGCAGCAGAGGATACTGAATTTGGAGAGTTGTATCTCTTCAAGTGGACTACTCTTCTCATCCCACCAACCACTCTTATAATCTTGAATATTGTGGGAGTTGTGGCTGGAGTCTCTGATGCCATTAACAATGGTTCTGGCTCATGGGGACCTTTGTTTGGGAAGCTATTCTTTGCCTTCTGGGTCATTGTTCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAAGCAAAATAGGACTCCTACCATTGTGGTCCTTTGGTCAATCCTTCTAGCATCCATTTTCTCATTGATTTGGGTCAGGATTGATCCTTTCTTGCCCAAGCAAACTGGTCCAGTACTCAAACAATGTGGGGTAGAGTGCTAA 3138 0.4222 MASNSMAGLITGSHSHFSHDSDEHKPPTRQSSSKTCRVCGDEIGYKENGELFVACHVCGFPVCRPCYEYERSEGNQCCPQCNTRYKRQKGSPRVVGDEEENFDAGDFDDEFQIKNHHDDLDQHRDVNHVENGDYNQQKLHPNGQAFSSAGSVAGKDFEGEKELHSNAEWQERVEKWKVRQEKRGLLNKEDGKEDQGEDDDYLLAEARQPLWRKVPISSSLINPYRIVIVMRLVILAFFFRFRILTPAYDAFALWLISVICEIWFALSWILDQFPKWFPITRETYLDRLSIRFEREGEPNQLAPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVCCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVHPTFVKERRAMKREYEEFKVKINALVANAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCFCCGGRKSKSKKKSGKGLFSGLYKKKKKMMGKDYVRKGSGSMFDLEEIEEGFEGYEELEKSSLMSQKSFEKRFGQSPVFIASTLMENGGFPEGTNTQSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTVPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVTIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi431g00064 1045 MobiDBLite consensus disorder prediction 1 15 - -
Sebi431g00064 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 110 IPR013083 -
Sebi431g00064 1045 MobiDBLite consensus disorder prediction 1 34 - -
Sebi431g00064 1045 Pfam Cellulose synthase 304 1038 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi431g00064 1045 Pfam Zinc-binding RING-finger 27 101 IPR027934 -
Sebi431g00064 1045 FunFam Cellulose synthase 19 110 - -
Sebi431g00064 1045 FunFam Cellulose synthase 421 595 - -
Sebi431g00064 1045 Coils Coil 402 422 - -
Sebi431g00064 1045 CDD mRING-HC-C4C4_CesA 34 84 - -
Sebi431g00064 1045 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 207 1012 - -
Sebi431g00064 1045 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 410 595 IPR029044 -
Sebi431g00064 1045 MobiDBLite consensus disorder prediction 16 30 - -
Sebi431g00064 1045 SUPERFAMILY Nucleotide-diphospho-sugar transferases 317 844 IPR029044 -
Sebi431g00064 1045 SUPERFAMILY RING/U-box 20 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi431g00064 Sebi-Chr431 795637 800615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi431g00064 7 1045 Cell Wall Biosynthesis AT5G17420 66.917 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi431g00064 K10999 - gmx:100781996 1939.47