Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi431g00061 ATGGCTGAAATTCACATTCCCACAGGCGCACCCACAATTAGCCCCACCATAAGCAAACCATGTAGTCCTCCACAACATGGTGGTACTAGTCTCAATTTAATGGTTCTTTTGGCAGCCATAGTGTGTGCCTTCCTCTGTGCTCTTGGCCTCAACACTACCTTAAAATGTGTCTTCCAATGTGCTAACCGTGTCCTTACGGAGCCTCTTCAATGGATTGCTTCTCGCAGGCTCAATTCAGGGCTCAAGAAGAAAGAAATGGTAGCTTTACCAACCTCAATTTATGCCCCTTCTTCTGGGTCTCCTCCATCTTCTTCAGATTCTTCTAATTGTGCCATTTGCTTAGCAGAGTTCTGTGATGGGGACAAGATAAGGTTCCTACCAAAGTGCAATCACTGTTTCCATGTGGAACATGATCAAGTCCAATGA 426 0.4531 MAEIHIPTGAPTISPTISKPCSPPQHGGTSLNLMVLLAAIVCAFLCALGLNTTLKCVFQCANRVLTEPLQWIASRRLNSGLKKKEMVALPTSIYAPSSGSPPSSSDSSNCAICLAEFCDGDKIRFLPKCNHCFHVEHDQVQ 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi431g00061 141 PANTHER RING-H2 FINGER PROTEIN ATL78 19 136 IPR044602 GO:0016567|GO:0016740
Sebi431g00061 141 MobiDBLite consensus disorder prediction 1 21 - -
Sebi431g00061 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 137 IPR013083 -
Sebi431g00061 141 SUPERFAMILY RING/U-box 109 135 - -
Sebi431g00061 141 Pfam RING-like zinc finger 109 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi431g00061 Sebi-Chr431 778108 778583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi431g00061 9 136 C3H Transcription Factor Family AT3G10910 35.664 9.90e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi431g00061 - - gmx:100803003 193.356