Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi431g00052 ATGGGGAAGTTCCCGAAGTCGAACAAGGCGCGCAGTGATCGTGCTGTAGGGCCGAAGTACCCTAGCAAGGTCATCAAGAAGGACTCTGCCAAGAAGACCGCGAAGAAGTCGCGCGTGAAGGCATTCGTGAAACTCGTCAACTACCAGCACCTCATGCCCACGCGTTACACCCTCGACGTCGATCTTAAGGACGCCGTTAGCCCCGACGTTCTCCACTCAAAGGACAAGAATATCACCGCACTCAAGGAGACCAAGAAGCGCTTCGAGAACGCTTCAAAACCGGCAAGAACCGGTGGTTTTTCACCAAGCTCAGGTTCTGAGCATTCCAAATCAAATTTCTCACCATTTTTGAATCTATCCAGTGTTTAA 369 0.5122 MGKFPKSNKARSDRAVGPKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVSPDVLHSKDKNITALKETKKRFENASKPARTGGFSPSSGSEHSKSNFSPFLNLSSV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi431g00052 122 MobiDBLite consensus disorder prediction 96 122 - -
Sebi431g00052 122 MobiDBLite consensus disorder prediction 83 122 - -
Sebi431g00052 122 Pfam Ribosomal L27e protein family 23 94 IPR001141 GO:0003735|GO:0005840|GO:0006412
Sebi431g00052 122 Gene3D - 12 114 IPR038655 -
Sebi431g00052 122 PANTHER 60S RIBOSOMAL PROTEIN L27 19 96 IPR001141 GO:0003735|GO:0005840|GO:0006412
Sebi431g00052 122 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi431g00052 Sebi-Chr431 679336 679795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi431g00052 12 100 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 63.542 4.01e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi431g00052 K02901 - gmx:100799485 122.479