Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi431g00051 ATGGTCTTCTCAACTGCCTTTCTCCATGATGATGGCCCCTTTATTTCTAGGAAAAGGCTGAGGGTGTCAGATCTTGGACATCAAGATATAGGTTTGCATGCAGATGCAGGAATTTGCAGTGATGTTTCCTTGTTCTCACAGCCAAATGTAGAAAGGAGTATTGGTGATATTTCCTCTTGCAGCAATATTGATGATAAACTTGATCCAGATTCTGGAATGGAGATGAGCTACCCATCAAATGTCAACAGTGGTGATGTTCCTGTGTCTACCACGGGTAATATTTCACACCTGGACCAGAGTTTCAGTGGCTATGTTCAACAGCCTACTTTTGTGAGTGGATGGATGTATGTGAATGAACATGGACAAATGTGTGGTCCCTATATAAAGGAGCAGTTATATGAGGGCCTAACAACTGGTTTCTTGCCATTTGAGCTTCCTGTATATCCTGTGATCAATGGCACAATAATGAACCCTGTACCATTGAATTATTTCAAGCAGTTTCCTGACCATGTTTCCACTGGGTTTGCATATCTGAGTATGAGTATCTCAGGCTCAAGAATGCCTTCAAATTGCTCCTCCTCTTCTTGTAAGGATATGGCAGTATATGGGCAAGATAGATCTTTTGAGCCTGCTGCTCTTTTGGCTGTTAACCCTGTTTCACAGTCTGTTTCGCAGTCACATATCAATTACTACATGAAGGAATCCAATCACATAAATTCAAACTCAGAAGCATTCAACAGTATAATATCTTGTCAGATGTTAGGTGAAGAATGTTGTTGGCTTTATGAGGATGAAAAGGGTATGAAACATGGACCACATTCGATTTCAGAATTGATTTCCTGGCACCGCCATGGATATCTTGGAGATAAAACAGTGATCTCTCATTCTGAAAATAAGTATGGGACCTTTTTGCTACTGTCTGCTGTAAATGCTTTGAAAGGAGACGGATCTGGAACCATCTGTGAAATATCTGAAAATGTTTCTTCCCAATTGCACATGGGTATCATGAAAGCTGCCCGAAGAGTTGTGTTAGATGGCATTATTGGTGATATCATTGCAGAATTTGTTGCGGAAAAGAAACAAAAGAGGCGTAAGATTGAATCAGCTGATCAGACTTCTGAGACTTGCATGTTGGACAATAAAATGTCTACGTCTTCTGTGGAGATGAGTAAAGGTACTGCCATTCCAAGTGAGACTGCAACTTCCCATATTTTGGATGATAAGGCTTGTCATGAAATTTCCAGACCATCTTCAACAAACTTTAAATCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTCTGATTATTGCTTGGAAGTCATGTGGAATGCAGTGTTTTTTGACACAGTGTCAGAGTTCTTATTTTCCTGGAGGAAGAGGAAACTTTGGTCTCATCCTAAGCCTCAGCCATCTGTTAATGGATGTAAAGATTATGTTGAAAAGAGTGAATTAGATGCTTTGGTTCTCAGGCCAGGTTCCTCTGTATGCAATGCTGATGGCAATATTCAGTTTGGAGTGCTGGCAACAGAAAGAGATGATCATCCTCAGCTACTATCTTCTCCTAGTAGCCTCAAAGGTGGAAACTTACTAGAAGGTCAAATGGTTTCATGCACTTATCATAACTCTATAGATTTGACATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGTTGTCTTTAGCTGATTATATTCAAACTTTTGTTGAAAAGGAAGTGAACAAATTAATTCCTTCTCAAGAAGACGGAAAATTGAGTGAGGTTGCGGTTAATGACTGTGGTTTCCCTGAGATACTTACTTGTAAAACATCTGTGAAGGAAATTCTAAATTGCAAATCTGAGGATCCTGTAAAAGATGGTTATTCATTTTGTGTGTCTGCATCTGGAAATCATATGTCTAATGTGTTCTCAAAAGCATTTAAAGAATTGTGTGGGTATTTAGACGAGGTGGTTGATGAAGAGGAGATTGGTGACCTACCACCTGGATTTGACAAGAAATCTAATTTTTTTTTCCCAAACTACAATTTGAAATTTCGACCTTCAAGGTTACGTGAACGGAAAACATTCAGTGCAAACAAGGAACAATTGAATGTTGCTACTTCTGGACTCAGAAGAGTGAAGGAAGGAGCAAAAAGTTCGTCTGGAGCTCCTCAGGCGATTGGAAAGTATACATATCACCGCAAGAAGCTGTCACGTAAAGAGTTGTGTTCCTCTCAATCTGTGAAAGAAGATGATTCAGGGCCAGGGAAGCAGCCTGTGGCTAAGTTAAGGAAACCTGTTTCTGGGGGTGTGAACGAGACTGCAGAAGATAAAATAACTGCTGTTAAACGTGGAAAGGCTATGGTGATTAAAGAGAAGAAGGATACATCTGCTAAGGGCAGGCCTTCTCCTGTCATTGTCAATAGTAGCTCACTCAGTGATCAATTATCCTTGAAGAATAAAACTAGTCGGAAAGTTTTGAAGAATACAGTTCAAAATGATGATATGGATGTTGTAAAGTCTAATGAAAAAAGGCTTTCAGCTTCAACAAATAATAGTGTTGGCTTGAAGAAGGTGGTTAGAAGTGATGTCTGTGATAGCGTCATTCAAGGGAAGACCACTGGTCAATGCTCCAAAGAGATGCTAAATGCAACAAAAAAAGTATCAAAATCAAAAAGGAAGCATCAGAGAGATGGTATAACATCCTCACATCCTGCAAAGGTTTTGAAAATTTCAAGTAATGGTGCCAGTCTGGGAGCTAGCAAACAGGCTACTGTGGCAAGGAGGAAATCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGATGTGCTAGGACTTCTATTGATGGTTGGGAATGGCATAAATGGTCTCAAAGTGCCAGTCCTGCATATAGAGCACGTGTCAGGGGTGTTTCATCTATACAAAACAAGCGCATAGATTCTGAAAATAATTTATCTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAATTGCGTAATCTTCTTGCTGCTGCAGAGGGTGCAGATCTTCTTAAAGTGCCTCAATTGAAGGCAAGGAAAAAGCGATTACGTTTTCAAAGGAGCAAGATACATGACTGGGGTCTTGTTGCCTTGGAGCCAATAGAGGCAGAGGACTTTGTCATTGAATATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGTGAGCGTCAATATGAGAAAATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGGTTGCAAGATTTATTAACCATTCTTGTGAGCCTAACTGTTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTTATATATGCAAAACGGCATATAGCCGCTGGTGAAGAAATCACATACAATTATAAGTTCCCCTTGGAAGAGAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTAA 3501 0.3967 MVFSTAFLHDDGPFISRKRLRVSDLGHQDIGLHADAGICSDVSLFSQPNVERSIGDISSCSNIDDKLDPDSGMEMSYPSNVNSGDVPVSTTGNISHLDQSFSGYVQQPTFVSGWMYVNEHGQMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLSMSISGSRMPSNCSSSSCKDMAVYGQDRSFEPAALLAVNPVSQSVSQSHINYYMKESNHINSNSEAFNSIISCQMLGEECCWLYEDEKGMKHGPHSISELISWHRHGYLGDKTVISHSENKYGTFLLLSAVNALKGDGSGTICEISENVSSQLHMGIMKAARRVVLDGIIGDIIAEFVAEKKQKRRKIESADQTSETCMLDNKMSTSSVEMSKGTAIPSETATSHILDDKACHEISRPSSTNFKSVGSIENFWWSYAVVRKVLSDYCLEVMWNAVFFDTVSEFLFSWRKRKLWSHPKPQPSVNGCKDYVEKSELDALVLRPGSSVCNADGNIQFGVLATERDDHPQLLSSPSSLKGGNLLEGQMVSCTYHNSIDLTCILESVENELHFSSKLSLADYIQTFVEKEVNKLIPSQEDGKLSEVAVNDCGFPEILTCKTSVKEILNCKSEDPVKDGYSFCVSASGNHMSNVFSKAFKELCGYLDEVVDEEEIGDLPPGFDKKSNFFFPNYNLKFRPSRLRERKTFSANKEQLNVATSGLRRVKEGAKSSSGAPQAIGKYTYHRKKLSRKELCSSQSVKEDDSGPGKQPVAKLRKPVSGGVNETAEDKITAVKRGKAMVIKEKKDTSAKGRPSPVIVNSSSLSDQLSLKNKTSRKVLKNTVQNDDMDVVKSNEKRLSASTNNSVGLKKVVRSDVCDSVIQGKTTGQCSKEMLNATKKVSKSKRKHQRDGITSSHPAKVLKISSNGASLGASKQATVARRKSAKSKPLNLCPRSDGCARTSIDGWEWHKWSQSASPAYRARVRGVSSIQNKRIDSENNLSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGVARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCNCGSKK 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi431g00051 1166 Pfam SET domain 1045 1149 IPR001214 GO:0005515
Sebi431g00051 1166 SMART set_7 1033 1156 IPR001214 GO:0005515
Sebi431g00051 1166 Gene3D SET domain 964 1157 IPR046341 -
Sebi431g00051 1166 Gene3D - 249 329 IPR035445 -
Sebi431g00051 1166 SUPERFAMILY GYF domain 253 310 IPR035445 -
Sebi431g00051 1166 ProSiteProfiles GYF domain profile. 257 307 IPR003169 GO:0005515
Sebi431g00051 1166 SUPERFAMILY SET domain 1029 1165 IPR046341 -
Sebi431g00051 1166 CDD SET_SETD1 1021 1166 IPR037841 GO:0042800|GO:0048188
Sebi431g00051 1166 MobiDBLite consensus disorder prediction 746 776 - -
Sebi431g00051 1166 Coils Coil 352 372 - -
Sebi431g00051 1166 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 718 1166 IPR044570 GO:0042800|GO:0051568
Sebi431g00051 1166 ProSiteProfiles SET domain profile. 1033 1150 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi431g00051 Sebi-Chr431 662257 669656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi431g00051 1032 1162 C2H2 Transcription Factor Family AT2G23740 36.601 1.40e-16 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi431g00051 SET 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi431g00051 - - gmx:100805708 1649.41