Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi431g00005 ATGGAGGGCCAATCAGCTAAACGCAGAAGAGTTTACTCACTTGAACCAAACAAAGTAGTGCAAGCAACATTTACTAGAAATTACATGAACTATTTAGTTCCAGCTTTGATGAAGATCAAGGAAAAGAGTTCTACAGAACATAACAGCTATTGTGATTTTCAGAGTGTTGTCAAGTATGAAGTGGACAAGGCAATGGTGTTCTCAGCTCAAGGTTTTGCATGGAGTAATGCTCTTAAAGTCAAGCTTCAAAGGGATGGAGTCAATGTGAATAGTGGCAGCACTGGCTTTGTTGAAAATAAGGCTGGTGGTGAAGGTTCATCAAAGGTTTGTGACCAAAATGAAATGGTCCTCCCAATGGATTTTTTCTCTTCAAAGTCTGAGGCTAAGAATTTGATGTGTAAGTCTAAGCACAATGATGATGACATGCCACAAATGGGAAAGGATTTAACAGGAGAAAATGATGAAGATGAGGTTATCAATGGGCAGTTGAGGAGCTTAAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTCATGAACAAATGGTGACAGAACTAGAGAGCTATGTAAGTTGTTTGCAAATGCAGGTGGACATTCTTCAATGTCTTGCTCATGAGAGTGAGACAAGTTGA 630 0.3984 MEGQSAKRRRVYSLEPNKVVQATFTRNYMNYLVPALMKIKEKSSTEHNSYCDFQSVVKYEVDKAMVFSAQGFAWSNALKVKLQRDGVNVNSGSTGFVENKAGGEGSSKVCDQNEMVLPMDFFSSKSEAKNLMCKSKHNDDDMPQMGKDLTGENDEDEVINGQLRSLRRLIPGGEEMCHEQMVTELESYVSCLQMQVDILQCLAHESETS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi431g00005 209 CDD bHLH_AtIBH1_like 148 203 IPR044549 GO:0006355
Sebi431g00005 209 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 204 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi431g00005 Sebi-Chr431 33669 34298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi431g00005 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 46.988 1.67e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi431g00005 - - aprc:113852314 274.248