Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi430g00007 ATGGTGGGAACTCCGATTAACGGAAGAACAAGGCCAGCTTTTGGTGTTGTAAATGGTGGGGTGCATGATCTTGGCCCTAGTAGTACTCCACCAAGCAATGCTGGGTCTGATTATGGCATTATAGAGTTCACAAGAGAGGATGTGGAGGCCTTGCTGGGTGAAAAATCCAAAGGAAGGACAGATTTAATTATAAGATGGTTCCAAGACCTTGAGTTAAGCTACTCATTAGAGCAAGAAAGGTTAAAGAATTCATTGGAATTAGCCCAGCAGAAATGCATGGAAATAGAGTTGCTACTCAAAATCAAGGAAGAAGAACTAAATTCAATTATTGCGGAAATGAGAAGGAGTTGCACTTCTTTGCAAGAAAAATTGATTAAGGAAGAATCAGAAAAAACGGCGGCGATGGAGTCTCTTGTTAAAGAGAAAGAAGCTAGGCTTAACATTGAGAGGTCACAGGCTACACTATCGGAAGATCTTGGGAGAGCTCAACGAGAGCTCCAAAGTTCAAATCAGAAGATATCATCACTCAATGACATGTATAAGCGTCTACAAGATTACATAACAAGCTTGCAGCAGTACAATGGAAAACTTCATTCAGAGCTTTCTACAGCTGAAGAGGAACTTAAGCGCGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAACCTTACCATGTTAAAGGGCCAACTTGCTTTGTCTATGTCTTCTCAAGAAGAGGCAACAAAACATAAGGATGCTTTGGTTAGTGAGGCTGCATCTCTTCGATTAGAGTTGCAACAAGTGAGGGATGACCGGGACCGCCAATTATCTCAAGTGCAAACTTTAACTTCTGAATTACTGAAGTCTAAAGATTCTACAGAAAAGTCCTCCTCTGAACTGAACAACATGGCTATAAAAATTAATGAACTAGAGGCAAAATGTGCTTTGCAAGACGACCGGATTAAGGCATTACAAGAGCAGCTAACAATTGCAGATGAGAAACTGCAGGTTTCTGATATATCTGCAATTGAGACAAGAACAGAATTTGAAGGGCAACAAAAACTTGTAAATGAGTTACAAAGACGCTTGGCAGATGCAGAATATAAAGTTATAGAAGGAGAGAAGCTGAGGAAAGAATTACATAATACCATTTTGGAACTTAAAGGAAACATCCGTGTGTTCTGTCGAGTGCGGCCTTTGTTACCTGATGAAGGTAGCAGCACGGAAGGCAAGATTGTATCTTATCCTACATCGATGGAAGCTTCTGGACGAGGCATTGAATTGGCCCAAAATGGCCAAAAACATTCTTTTACGTTTGATAAAGTTTTTGCACCTGATGCATCACAAGAACAAGTTTTTACAGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAAACAGGATCAGGAAAAACCTATACAATGATGGGCAGGCCTGGACATCCAGAAGAAAAGGGCTTGATACCTCGTTCACTAGAACAAATATTTCAAACAAGACAGTCTCAGCAACCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACCATTCGTGATCTGTTATCTACAAACAAGTCACCATCAGAAGCAACACGCACAGAAAATGGTACTCCTGGAAAGCAATACACAATCAAACATGATGCCAGTGGAAATACACACGTTTCTGATCTTACAGTAGTGGATGTTCAGAGTGTAAAAGAGGTTGCATTTCTTTTAAACCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCAAGAAGTCATTTTGTATTCACTCTTCGAATATCTGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGCATTCTAAATCTTATTGATCTTGCTGGGAGTGAGCGTCTTTCAAGGAGTGGATCAACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTCTGTCATCATTAAGTGATGTTATATTTGCTTTGGCCAAGAAGGAGGATCATGTCCCATTCAGAAACTCAAAGCTTACATATCTACTTCAGGATAAGCATCTCCAGCTAGTGATAAAACAAAACTAA 2088 0.3999 MVGTPINGRTRPAFGVVNGGVHDLGPSSTPPSNAGSDYGIIEFTREDVEALLGEKSKGRTDLIIRWFQDLELSYSLEQERLKNSLELAQQKCMEIELLLKIKEEELNSIIAEMRRSCTSLQEKLIKEESEKTAAMESLVKEKEARLNIERSQATLSEDLGRAQRELQSSNQKISSLNDMYKRLQDYITSLQQYNGKLHSELSTAEEELKRVEKEKATVVENLTMLKGQLALSMSSQEEATKHKDALVSEAASLRLELQQVRDDRDRQLSQVQTLTSELLKSKDSTEKSSSELNNMAIKINELEAKCALQDDRIKALQEQLTIADEKLQVSDISAIETRTEFEGQQKLVNELQRRLADAEYKVIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGSSTEGKIVSYPTSMEASGRGIELAQNGQKHSFTFDKVFAPDASQEQVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTRQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNKSPSEATRTENGTPGKQYTIKHDASGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRISGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQDKHLQLVIKQN 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi430g00007 695 CDD KISc_C_terminal 380 685 - -
Sebi430g00007 695 Coils Coil 285 319 - -
Sebi430g00007 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 685 IPR027417 -
Sebi430g00007 695 Coils Coil 152 179 - -
Sebi430g00007 695 ProSiteProfiles Kinesin motor domain profile. 382 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 SMART kinesin_4 380 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 Coils Coil 341 368 - -
Sebi430g00007 695 Coils Coil 194 228 - -
Sebi430g00007 695 PRINTS Kinesin heavy chain signature 592 609 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 PRINTS Kinesin heavy chain signature 623 641 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 PRINTS Kinesin heavy chain signature 672 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 PRINTS Kinesin heavy chain signature 458 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 Pfam Kinesin motor domain 388 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi430g00007 695 Coils Coil 78 105 - -
Sebi430g00007 695 Coils Coil 243 277 - -
Sebi430g00007 695 Gene3D Kinesin motor domain 329 688 IPR036961 -
Sebi430g00007 695 MobiDBLite consensus disorder prediction 531 556 - -
Sebi430g00007 695 Coils Coil 110 145 - -
Sebi430g00007 695 PANTHER KINESIN-LIKE PROTEIN KLP-3 244 685 IPR027640 GO:0003777|GO:0007018
Sebi430g00007 695 FunFam Kinesin-like protein 328 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi430g00007 Sebi-Chr430 236220 241278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi430g00007 355 685 Calmodulin-binding Proteins AT5G65930 38.973 1.37e-67 239