Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi430g00005 ATGTGTTTTGTGTCAAATGAGGGTCACATTAACTTGATCAAGGAAGATGGTGCAGCACTGATCTTTTTATGCTGTTGTCGGTGTTGTGGAAGTGGCCGAGTGAGACAAAATGATGAGAGGCCCCTTCTCAGTATGAGCATGAATGACTACTCTGTTGGCTCTTCTTCCAATAATAACCCATTAAAAGAGGAGAAAGATGGGTTTCAGTCATCATTTAACACAGTGGTTGATGACAAGAAGAACTCAGTGCAGGAAAGTCAAGCAGCAGGAGTTGCTAGTGCTGCTGCAAGACCATCATTTGAACTGAAACCTCCTCCTGGGAGGGGTGGTAAAGGTCCTCCACCACCACCTAGGGGTGGTATAGGTCCTCCACGAGCTCCTCCTCCAATAGGCCCAAAGATAGCTAGACCTGCACCTCGTGGACCAAAGGCTCAAGAGAATGCTGAAGCTAGTTCAGAAGGTGAAGCTAATGCTCCTAAGACCAAGTTAAAGCCTTTTTTTTGGGATAAGGTTCAAGCCAATTCAGATCAATCAATGGTTTGGAGTCAGATCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAAACGCTTTTTGGCTATACTGCTCCACCTGCAGATAAAATCAAAGGCATGCAAAAGAAAGAGTCCTCTTCCCAGGATCCTTCACCTCAGTATATCCAAATCGTTGAGTCAAAGAAAGCACAAAATTTATCAATTCTGTTGAAAGCATTGAATGTGACACTGGAAGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTTTACACCCTGCTGAAGATGGCACCAACTTCAGAGGAAGAACTTAAGCTTAGACTTTTCAATGGTCACCTTTCCAAGCTTGGGCCTGCTGATCGATTTCTGAAAGCCTTGGTTGAGATTCCATTTGCTTTTAAAAGAATGGAAGCATTGCTTTACATGGGTACTCTTCAAGAGGAACTCACTACTACCCGGGATGCTTTTGCAATTTTGGAGGTTGCCTGTAGGGAACTAAGAAGCAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGGACATTCCGTGGTGGTGCACTAGCATTTAAACTTGATACACTACTGAAACTATCTGATGTTAAAGGAGTAGATGGCAAGACTACTCTCTTACTCTTCGTTGTTCAAGAGATAATCCGCACTGAGGGCATAAGATCTGCTCGTATGGCAAAAGAGAGCCGTAGTTTCTCTAGCATAAAAACTGATGACCTTCTTGAGGATGTTGCTCAGGAATCAGAAGAACACTATCGTGAACTTGGTCTTCAGGTGGTTTCACGTCTGAGCAGTGAACTTGAGCATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGGCTTAACAGGAACAACTGCTAGACTAGGCCATGGTCTCATAAAAACAAGAGACTTTGTAGACAAAGAGATGAATAACACAGAGGACGATAAAGGGTTTCTTGAGACGGTTAAGAGTTTTGTGGAGAAAGCTGAGGTTGATGTCACCAGACTGCTGGAAGAAGAGAAGAAAATCATGGCTTTAGTGAAGAGCACTGGTGATTACTTCCATGGGAATTCTGCGAGGGATGAAGGCTTAAGATTGTTTATAATAGTACGTGACTTCTTAGTAATGTTGGATAAGGTATGCAAGGAGATTCAAAAAGCACCAAAGAAGCCAACACCAGCAACAAAAACTGTGAAACAAGATACTCCTAGTTCTAGAGGGTCATCTTCCTCTGAAACTCGTCCTCCGCCTCCTCCTGATATTCGCCAGCGGCTTTTTCCAGCAGTGGCAGATAGGAGGGTTGATGACTTTAGTTCAGATGATGAGAGTCCATAG 1887 0.4372 MCFVSNEGHINLIKEDGAALIFLCCCRCCGSGRVRQNDERPLLSMSMNDYSVGSSSNNNPLKEEKDGFQSSFNTVVDDKKNSVQESQAAGVASAAARPSFELKPPPGRGGKGPPPPPRGGIGPPRAPPPIGPKIARPAPRGPKAQENAEASSEGEANAPKTKLKPFFWDKVQANSDQSMVWSQIKAGSFQFNEEMMETLFGYTAPPADKIKGMQKKESSSQDPSPQYIQIVESKKAQNLSILLKALNVTLEEVCDALLEGNELPTEFLYTLLKMAPTSEEELKLRLFNGHLSKLGPADRFLKALVEIPFAFKRMEALLYMGTLQEELTTTRDAFAILEVACRELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKTTLLLFVVQEIIRTEGIRSARMAKESRSFSSIKTDDLLEDVAQESEEHYRELGLQVVSRLSSELEHVKKAAALDADGLTGTTARLGHGLIKTRDFVDKEMNNTEDDKGFLETVKSFVEKAEVDVTRLLEEEKKIMALVKSTGDYFHGNSARDEGLRLFIIVRDFLVMLDKVCKEIQKAPKKPTPATKTVKQDTPSSRGSSSSETRPPPPPDIRQRLFPAVADRRVDDFSSDDESP 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi430g00005 628 MobiDBLite consensus disorder prediction 81 161 - -
Sebi430g00005 628 MobiDBLite consensus disorder prediction 570 628 - -
Sebi430g00005 628 Pfam Formin Homology 2 Domain 155 561 IPR015425 -
Sebi430g00005 628 PANTHER FORMIN-RELATED 19 617 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sebi430g00005 628 MobiDBLite consensus disorder prediction 610 628 - -
Sebi430g00005 628 SMART it6_source 153 576 IPR015425 -
Sebi430g00005 628 MobiDBLite consensus disorder prediction 107 136 - -
Sebi430g00005 628 SUPERFAMILY Formin homology 2 domain (FH2 domain) 166 574 - -
Sebi430g00005 628 Gene3D Formin, FH2 domain 158 594 IPR042201 -
Sebi430g00005 628 MobiDBLite consensus disorder prediction 579 595 - -
Sebi430g00005 628 ProSiteProfiles Formin homology-2 (FH2) domain profile. 153 587 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi430g00005 Sebi-Chr430 210220 215369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi430g00005 123 587 FH2 protein (formin) Gene Family AT3G25500 46.545 4.92e-126 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi430g00005 - - gmx:100792872 734.947