Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi42g00013 ATGGCAAGGTGGGGGTATTGTTACAAGGAAGTGGCTCCATTTTCTGCATTGGTAATAGTGCAGTTTACTGAGGTTTGCGTCAACATTCTATTCAAGGAAGCTACTATGAAGGGGTTGAGCTACTATGTTTTCATCCTCTATTCACTTGCTCTCTCCACTCTTATTCTGCTTCTCCCTTTGCCCTTCATCTTCCGCAGGTCAACTGGACTTCCTTCATTAAATTTGTCGATCCTCTGCAAAATTTTCTTCCTGGGATTGCTTACATTTTCAGCTCTGATATGTGGATATAAAGGTATTGAATACAGCTCGCCAAGTCTTGCGTCTGCTGAGAGCAATCTCGCTCCGGCTTTTATCTTCATACTTGCTGTCCTTTTCAGGATGGAAAAGGCAGCTTTAAGAAGTTCTAGCACTCAGGCCAAAATCTTGGGTTCAATAGTATCAATAGCAGGTGCGCTCATAGTTGTTCTCTATAAAGGACCTACAGTCTTAGAAGCTGCATCTCAAACTCCTTCACTTGGTTCTTTGCAAAGGAATTGGGTTCTAGGCGGCTTTCTACTTGCGGTTGCATATATTCTAGTGTCAATCTGGTACATCGTCCTGACCCATGTTATGAAATTGTATCCAGCAGAGATGGTTGTGGTGTTATTGTGCAACTTGTGTGGGACTATCATAGCTGCCCCTGTTTGCTTTCTAGCAGAAGGAAACTTGAGCGCTTGGAAACTAAAACCTGATATAACACTGGTGGCTGTTTTATACTCAGCATTCTTTAGCACATTCTTCAGCACTGTTGTTCATACATGGGGCCTACATGTGAAAGGTCCTGTATATGTATCAATCTTCAAGCCCCTCTCAATTGCCATAGCTGCTGCTATGAGTGTCATATTCCTTGGTGAACCTTTGTATCTAGGAAGTGTTGTTGGAGCAGTAATACTATGTACTGGGTTTTATGCTGTTATATGGGGGAAAGCAAAGGAAGAGGAATTTAGTGATCAGGACTTTGACATAGGTGGTATAGATTCAACTCCACCATCCAATAGTAACACTCCTTTTCTTTCCAACGTGAAAATCACATATAACGATTGTTGA 1086 0.4199 MARWGYCYKEVAPFSALVIVQFTEVCVNILFKEATMKGLSYYVFILYSLALSTLILLLPLPFIFRRSTGLPSLNLSILCKIFFLGLLTFSALICGYKGIEYSSPSLASAESNLAPAFIFILAVLFRMEKAALRSSSTQAKILGSIVSIAGALIVVLYKGPTVLEAASQTPSLGSLQRNWVLGGFLLAVAYILVSIWYIVLTHVMKLYPAEMVVVLLCNLCGTIIAAPVCFLAEGNLSAWKLKPDITLVAVLYSAFFSTFFSTVVHTWGLHVKGPVYVSIFKPLSIAIAAAMSVIFLGEPLYLGSVVGAVILCTGFYAVIWGKAKEEEFSDQDFDIGGIDSTPPSNSNTPFLSNVKITYNDC 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi42g00013 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Sebi42g00013 361 PANTHER WAT1-RELATED PROTEIN 13 330 IPR030184 GO:0016020|GO:0022857
Sebi42g00013 361 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020
Sebi42g00013 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi42g00013 Sebi-Chr42 491701 493802 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi42g00013 4 348 Nodulin-like Gene Family AT5G40230 54.520 8.46e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi42g00013 - - gmx:100805667 436.032