Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi42g00012 ATGGAGAAGGTGGCTTTAAGGAGCTCAGGTAGTCAGGCCAAAATCTTGGGTTCTATGGTATCAATATTAGGTGCTCTCATAATTGTTTTCTATAAGGGCTTTACAATCTTACCAGCTTCTTCATCTCCCCTACTATCACCTACTGTTGATTCTCCCATTGTCTCCACATCATCACAAACAAATTGGGTTCTTGGCAGTTCTCTACTTGTCATTGAGTTTCTTCTGGTTCCAATTTGGTACATTATTCAGGGATTCTTTTGCACAGGCTTAAGTTGTTTGGTTCACACTTGGGGCCTTCATCTCAAAGGCCCTGTATTTATATCACTCTTTAAGCCTCTATCAATAGCCATTGCTGCTGCTATGAGTGCTATACTCCTTGGTGATGCACTATATTTTGGGACTGTTGTTGGAGCAGTAATACTATCAATTGGGTTTTATGCTGTTATGTGGGGGAAAGAAAGAGAAGAAGAACTGAGTGAGGGCTATGACATAGCTCGACCTCCATCCAATAGCAAGACTCCTTTGTTGCAGAGCTCCAATGTGAAAGATAACGGAGAAATCATGTATACCGATAGTTGA 579 0.4128 MEKVALRSSGSQAKILGSMVSILGALIIVFYKGFTILPASSSPLLSPTVDSPIVSTSSQTNWVLGSSLLVIEFLLVPIWYIIQGFFCTGLSCLVHTWGLHLKGPVFISLFKPLSIAIAAAMSAILLGDALYFGTVVGAVILSIGFYAVMWGKEREEELSEGYDIARPPSNSKTPLLQSSNVKDNGEIMYTDS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi42g00012 192 PANTHER WAT1-RELATED PROTEIN 83 162 IPR030184 GO:0016020|GO:0022857
Sebi42g00012 192 SUPERFAMILY Multidrug resistance efflux transporter EmrE 73 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi42g00012 Sebi-Chr42 482040 483153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi42g00012 1 185 Nodulin-like Gene Family AT5G40240 38.655 6.11e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi42g00012 - - gmx:100805667 222.246