Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi42g00010 ATGGCGTCCTGCGTCCAGTGGGAAGGGATGGTGGTGCGAGGAAAGTCGCTTCTCGTAACCTGTGGCTCTTCCCCACTAACTTCGAAGAGGAGAAGGGTCACCAACATTTATTCCACGGACATGGATATTGAAGCTGCTAAGGCCAAGCTTGCAGCTATGAAAGAAAAATTTGGACGAGAGATCCATGTTTTTGAAACATCAGCTCTTTCTCCATCTTCAAATGCTGCATCATCCAATGGAGAGGAGACTGATGACTTCTATGAGTTTACTGCGGAAGATTATTACCGACTTATGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAACTCATAGGTCAAGAATAACCAAAGCAGTAATTAGAGTTCGCTTCCCCGATAATCACACATTGGAGGCTACCTTCCACCCATCAGAAACAGTCCAGTGTTTAATTGATCTCCTCACTAAAGTGATTGCACAGCCAGAGCAGCCATTTCATATATGTGATAGCACTGTTGTTGATTATATTGGACCTTATCTACACGAAGAGGTCTTATCTTTGAAGGGTTTGGATGGTGCTAATGATGAAGGCCAGCAATCTGAAACTGTGCAGTGTGTACCAGAGCCTGTTGAGGCAACACAACCCCCTTCAGTCCAAGAACGTAAGCCTGCTGATAAGAAGCTTATTAAACCAAAAATGGCTAAAAATGTGATATCACTTTCCTAG 732 0.4344 MASCVQWEGMVVRGKSLLVTCGSSPLTSKRRRVTNIYSTDMDIEAAKAKLAAMKEKFGREIHVFETSALSPSSNAASSNGEETDDFYEFTAEDYYRLMATKKEDKFLKTRKIREAEEATHRSRITKAVIRVRFPDNHTLEATFHPSETVQCLIDLLTKVIAQPEQPFHICDSTVVDYIGPYLHEEVLSLKGLDGANDEGQQSETVQCVPEPVEATQPPSVQERKPADKKLIKPKMAKNVISLS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi42g00010 243 MobiDBLite consensus disorder prediction 195 209 - -
Sebi42g00010 243 MobiDBLite consensus disorder prediction 193 227 - -
Sebi42g00010 243 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 175 236 IPR044232 GO:0032984|GO:0051117
Sebi42g00010 243 SUPERFAMILY Ubiquitin-like 100 169 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi42g00010 Sebi-Chr42 439151 446686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi42g00010 55 155 C2H2 Transcription Factor Family AT2G01650 32.381 4.84e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi42g00010 K15627 - gmx:100818386 306.219