Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi42g00008 ATGAATAAGCTCCACACAACACATTCTTGGGATTTTCTTGGATTAGACCCAGCCTACAAGAGTGACAGTGCTGCTATGGACTCTTCATCCAATGCCATTGTTGGGGTGTGGCCTGAATCAGAAAGCTTCACTGATTATGGATTAGGTCCTGTGCCCGAGAAATTCAAAGGAGATGCCCGGTTCTGTTCAAAAGGGTTTGAAGCAAAAATTGGTCCTCTGGAAGACGTTGTTAACAAAATTTTCTTCAGGTTAGCACGAGATAGTGATGGACATGGAACACACATTACTTCTACGATTGCAGGATCCATTGTTGCTAATGCCAGCTTATTCGATATGGCCAAAGGAACTGCTAGAGGTGGTGCCCCAAGTGCCAGACTTGCCATCTACAAAGCCTGTTGGTTTGGGTTTTGCAGTGATGCTGAATGGAGAACCCTTAAAAAGGGAAGAAGGAATAAAAAGGGAGAAAGAAGGAATGAGGGACAGATTGGGGATTCTGAAAAAACAAAGCATCAAAACGCTGTCGTTTAG 528 0.4394 MNKLHTTHSWDFLGLDPAYKSDSAAMDSSSNAIVGVWPESESFTDYGLGPVPEKFKGDARFCSKGFEAKIGPLEDVVNKIFFRLARDSDGHGTHITSTIAGSIVANASLFDMAKGTARGGAPSARLAIYKACWFGFCSDAEWRTLKKGRRNKKGERRNEGQIGDSEKTKHQNAVV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi42g00008 175 ProSitePatterns Serine proteases, subtilase family, histidine active site. 91 101 IPR022398 -
Sebi42g00008 175 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 140 IPR045051 -
Sebi42g00008 175 Gene3D Peptidase S8/S53 domain 35 141 IPR036852 GO:0004252|GO:0006508
Sebi42g00008 175 MobiDBLite consensus disorder prediction 148 175 - -
Sebi42g00008 175 SUPERFAMILY Subtilisin-like 4 141 IPR036852 GO:0004252|GO:0006508
Sebi42g00008 175 MobiDBLite consensus disorder prediction 148 166 - -
Sebi42g00008 175 Pfam Subtilase family 85 141 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi42g00008 Sebi-Chr42 221198 222050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi42g00008 3 137 Subtilisin-like Serine Gene Family AT5G67360 43.038 2.04e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi42g00008 - - gmx:106794255 211.846