Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi42g00001 ATGGATCTAGAGACTGTGATCTACAGAAACTCAATTAAGGAGAAATCATGGACGACAGTGTTAACTTTAGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACATCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGACATTCAACATTCAGAGACAAATGAAGAAATATATGGGGTCTTGTCTTTTGTGTTCTGGACCCTTACACTGATTCCACTCCTCAAGTATGTGTTCATTGTGCTTAGAGCAGATGATAATGGTGAAGGAGGAACTTTTGCTCTGTATTCACTGCTATGCCGGCATGCCAAGGTAGGATTGTTGCCTAATATTCAGCAAGCAGATGAGGAATTAACTGAGTACACTAAAGATGGAACAGTGCCAATCGATAAGAAAAATGTTGGGTTGGTCTTGAAATCGATGTTGGAGAAGCACAGGGTGCTGCAGAGGGTGCTGCTTGTTCTGGCTTTGATAGGAACTTGCATGGTTATTGGGGATGGTGTTCTTACCCCTGCACTTTCTGTTTTCTCTGCTGTATCTGGTTTGGAGCTTTCCATGTCTAAAGAGCAGCACCGATATGTTGAAGTCCCAGTTGCTTGTGTAATACTGGTATTTTTGTTTGCGCTTCAACATTATGGGACCCATCGTGTGGGATTTTTATTTGCACCTGTTGTGATGACCTGGCTGCTATGCATCAGTGCTATTGGTTTGTATAATATTTTGCATTGGAACCCGCATGTTTATGAAGCTCTCTCTCCATTCTACATGTTCAAATTTCTGAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTGGGTGGGATTCTACTCTGTATAACGGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCAATTAAGAAAAACACTTATCTGCAGATTGCTTTTACATGTTTGGTATACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCGTATCTATCCAAGCATCATGCTATTGAAAGTGATTACCGAATTGGGTTCTATGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGTAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTATCATCACAGGTACTTTCTCAATAATCAAACAATGTTCTGCCATGGGATGCTTCCCCAAAGTCAAGATCATTCATACATCATCAAAGGTACATGGTCAGATTTATATTCCAGAGATTAACTGGTGCTTGATGCTACTTTGCCTGGCCATTACTGTTGGATTTAGAGATACAAAAAGAATGGGGAATGCATCAGGGTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTTATAGTCTTATGCTGGCATAAAAGTGTTTTCCTAGCCATATGCTTTATATTCTTCTTTGGCTCTATTGAGGCACTCTACTTCTCTGCATCACTCATCAAGTTCCTTGAAGGGGCTTGGGTCCCCATTGCCCTCTCTTTCATCTTTCTCATTATCATGTGCGTGTGGCACTATGGCACACTCAAGAAGTATGAGTTTGATGTTCAAAACAAGGTGTCCATCAACTGGCTCCTTGGTTTGGGACCCACTCTAGGAATTGTGAGGGTTAAGGGAATTGGCCTCATACATACAGAACTTGTATCTGGGATCCCAGCTATTTTTTCTCATTTTGTTACCAATCTGCCAGCTTTTCATCAGGTTGTAGTCTTCCTTTGCATCAAATCTGTTCCAGTTCCACATGTCAGACCTGAAGAAAGGTTCTTGGTAGGTAGAGTTGGACCAAAGGAATATAGGCTTTATAGGTGCATAGCAAGGTATGGCTATCGTGACATTCACAAGGATGATGTTGAGTTTGAGAAAGATCTTATCTGTAGTATAGCAGAATTCATACGCTCAGATACTTCAGATCATGGCCTAGGATTTGAGAGTTTTGAAGATGATACAAAGATGACAGTTATTGGGACTTCATCATCAAACTCAGAAGGTGTAAGGATGTGCGAAGATGAACAAGATATTTCTCAAATGGAAGGTGCTTCAGAACTGAGGGAAGTAAAGTCTCCTAAAAAAGTGAAGAAGAGAGTGAGGTTTGTTGTGCCAGATAGTCCACAGATTGATTTGGAAGCAAGGAAGGAATTGCAGGAGCTAATGGAAGCAAGGGATACAGGAATGGCATTTATAATGGGTCACTCATATGTGAAAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGCTATTATCAATTATGGGTATGATTTCTTAAGGAGAAATTCTAGAGCACCAACTTATGCTCTAAGTATCCCTCATGCATCTACCCTAGAGGTGGGAATGATATATCATGTCTAG 2346 0.4101 MDLETVIYRNSIKEKSWTTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHAKVGLLPNIQQADEELTEYTKDGTVPIDKKNVGLVLKSMLEKHRVLQRVLLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVMTWLLCISAIGLYNILHWNPHVYEALSPFYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKKNTYLQIAFTCLVYPSLILAYMGQAAYLSKHHAIESDYRIGFYVSVPEKIRWPVLVIAILQAVVGSQAIITGTFSIIKQCSAMGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSVFLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIIMCVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDVEFEKDLICSIAEFIRSDTSDHGLGFESFEDDTKMTVIGTSSSNSEGVRMCEDEQDISQMEGASELREVKSPKKVKKRVRFVVPDSPQIDLEARKELQELMEARDTGMAFIMGHSYVKAKRGSSWIKKAIINYGYDFLRRNSRAPTYALSIPHASTLEVGMIYHV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi42g00001 781 NCBIfam potassium uptake protein 23 781 IPR003855 GO:0015079|GO:0016020|GO:0071805
Sebi42g00001 781 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 780 IPR003855 GO:0015079|GO:0016020|GO:0071805
Sebi42g00001 781 Pfam K+ potassium transporter 25 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi42g00001 Sebi-Chr42 50934 57794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi42g00001 1 779 Inorganic Solute Cotransporters AT5G14880 76.561 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi42g00001 K03549 - qsa:O6P43_004598 1367.83