Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi429g00031 GTTAGGGTGAAGATTAAGGTGGTCACGGGTAGTCCCAGTGGCGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTGAAACATTGCATGGATGAACTAAACTGTAACATTGTGGTGATGAATGGCTCTCAGCCAAAAGTCCTCAGGCTTAACTTAGGATCCTCCGATGAACTCCAAACTCCTTTTTTCTCTGCTGCTTCTTCACCAGGCATAGAAATTGGAATGCTAAAAGGGCGCAGATTGAAGCATTCCACCCCAGTAAGTAGCCCTGAAGAAGCAGAAGCAGGTACTTCTGTTACAAGAAACACAGGAGCAAATTCAGTGTCAAGTTCTGACTCAACGACTTCTCCTTTCCTAGTCTATGAACAAAACCCCCTATACGAGGGTCAGGGACCACAGAAAAGAACAAACAAACCAATCAACGAGCCAAAAGATTTCAACCTCCATCCACCATTGTACTCTGATTCGGAAAAGGATCGTCTACCCCTTTTGTGGACACGCCCAACATCGTCTGTGGCTAGTGATAACAAGACTGTATTTTGGATTCATCAAAACCACATTATACATGAAAAACCTCAGAAAGCTGAAAGCAGAATTATCCAAAGAACTAAATCTCCAACTTCTAAAACATTACTTGAGAATTTTATACATGGTGATCAAGAGATGAGAGCAGATGAACTTGGGTTTAACCAAGCTCAAAGTAGAAGTTATGTTAAAAACTCGGGCACAAAAAGTGATTCCATTCCTTTGGGCAGAACTTCCTCTATACCTCCTCCCTTATGCTCACAGTGTCAGAATAAAGCACCAGTATTCGGAAAGCCTCCTAGACGGTTTTCTTACAAAGAGCTAGAGGAAGCTACAGACATGTTCTCAGATGTGAATTTTTTGGCTGAAGGTGGATTTGGTGTAGTTCACAAGGGAATACTCAAAGATGGCCAGGTTGTTGCAGTGAAACAGTTAAAGTTTAGTGGCTCTCAAGCAGATATTGATTTCTGCAGGGAAGTTCGGGTTTTGAGCTGTGCTCAACACAGAAATGTTGTATTGTTGATAGGATATTGTATAGAAGGCAATTTGAGGATTTTAGTCTATGAGTACATATGTAACGGATCCTTGGACCTCTGCTTACATGGAGACGAGAGCATACCGTTGGATTGGAACTCCCGCTTAAGGATAGCAATTGGAGTTGCACGAGGCTTACGCTACCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGGCCCAAAAATATCCTCTTAACCCATGATTTTGAACCTCTGGTGGCTGATTTTGGACTTGCTAGATGGCACTCAGAATGGAATATAAATACTGAAGATCGCGTTATAGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGAGGCTGGAAATCTAACATACAAAGTAGATGTATATGCATTTGGAATTGTTTTATTGGAGTTAATAACCGGTCGAAGAATTAGGGAGTTGGAACAGTTTAATGGACACTCCTATATTTCTGAATGGTTTCACCCCATTCGCATGTTAGAGCCCAATCATATCATACAAAACGTTCGATCTCTTAACCCGTGCTTGGATTCTGAGGCGTCACTGGAATTTAATCTTCAATTGCAAGCCATGGCACGAGCTGCTTCATTGTGTCTACGTCTGGATCCTGATGCCAGACCCCCAATGTCAAAGATCCTCAGAGTGCTGGAAGGGGGCGATCCAGCAGGTCCTATGGGTTTAGACATCAATTCAGTTGGCAACAGAAGTGGCCATTTAAGTGGTTTGACTTCGCACACTCCACCTAAAGGTACAGTAAGCCATTCTCGTAGGCTATCACATTGA 1875 0.4315 VRVKIKVVTGSPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCNIVVMNGSQPKVLRLNLGSSDELQTPFFSAASSPGIEIGMLKGRRLKHSTPVSSPEEAEAGTSVTRNTGANSVSSSDSTTSPFLVYEQNPLYEGQGPQKRTNKPINEPKDFNLHPPLYSDSEKDRLPLLWTRPTSSVASDNKTVFWIHQNHIIHEKPQKAESRIIQRTKSPTSKTLLENFIHGDQEMRADELGFNQAQSRSYVKNSGTKSDSIPLGRTSSIPPPLCSQCQNKAPVFGKPPRRFSYKELEEATDMFSDVNFLAEGGFGVVHKGILKDGQVVAVKQLKFSGSQADIDFCREVRVLSCAQHRNVVLLIGYCIEGNLRILVYEYICNGSLDLCLHGDESIPLDWNSRLRIAIGVARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWHSEWNINTEDRVIGTSGYLAPEYLEAGNLTYKVDVYAFGIVLLELITGRRIRELEQFNGHSYISEWFHPIRMLEPNHIIQNVRSLNPCLDSEASLEFNLQLQAMARAASLCLRLDPDARPPMSKILRVLEGGDPAGPMGLDINSVGNRSGHLSGLTSHTPPKGTVSHSRRLSH 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi429g00031 624 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
Sebi429g00031 624 SMART tyrkin_6 302 580 IPR020635 GO:0004713|GO:0006468
Sebi429g00031 624 SUPERFAMILY Protein kinase-like (PK-like) 282 580 IPR011009 -
Sebi429g00031 624 ProSiteProfiles Protein kinase domain profile. 302 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi429g00031 624 PANTHER OS01G0750732 PROTEIN 50 582 - -
Sebi429g00031 624 MobiDBLite consensus disorder prediction 597 624 - -
Sebi429g00031 624 FunFam Os07g0541700 protein 378 466 - -
Sebi429g00031 624 MobiDBLite consensus disorder prediction 102 133 - -
Sebi429g00031 624 Pfam Protein tyrosine and serine/threonine kinase 308 536 IPR001245 GO:0004672|GO:0006468
Sebi429g00031 624 ProSitePatterns Tyrosine protein kinases specific active-site signature. 423 435 IPR008266 GO:0004672|GO:0006468
Sebi429g00031 624 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Sebi429g00031 624 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 274 377 - -
Sebi429g00031 624 MobiDBLite consensus disorder prediction 93 160 - -
Sebi429g00031 624 MobiDBLite consensus disorder prediction 593 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi429g00031 Sebi-Chr429 869529 872578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi429g00031 252 576 Trihelix Transcription Factor Family AT1G68690 43.465 5.07e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sebi429g00031 PK_Tyr_Ser-Thr 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi429g00031 - - gmx:100813141 1070.84