Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi428g00044 ATGAAAAAAGGTGAACTATTGACAACCAAGGAAGCACAGAGGAGGCAACAATGTTATGATAAACTAGCATTGCATGGTCGTTTCTCTTCTACTCTTTTAGTTGTGAGGGAGCATCTTCCATCTGGAAAGGCATGCTTGAGATTGAACATTGATGCCACAAGAATAGGAAATGTTGCGCGGTTTGTAAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCGGGAGTTTTGTTCCCCTGCCTTTGCTTCTTTGCTTTAAAAGATATCCAAGAAGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGCCTAATGGATTGCCATGCTATTGCAATAACCCTTCTTGCTTTAGAACATTGCCTTCAGAAGACACTTGA 399 0.396 MKKGELLTTKEAQRRQQCYDKLALHGRFSSTLLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSSGVLFPCLCFFALKDIQEDEELTFSYGEIRKRPNGLPCYCNNPSCFRTLPSEDT 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi428g00044 132 SMART set_7 14 111 IPR001214 GO:0005515
Sebi428g00044 132 Pfam SET domain 47 105 IPR001214 GO:0005515
Sebi428g00044 132 ProSiteProfiles SET domain profile. 1 105 IPR001214 GO:0005515
Sebi428g00044 132 Gene3D SET domain 2 132 IPR046341 -
Sebi428g00044 132 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H 4 126 - -
Sebi428g00044 132 SUPERFAMILY SET domain 3 123 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi428g00044 Sebi-Chr428 798619 799017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi428g00044 4 123 C2H2 Transcription Factor Family AT2G23740 29.323 2.02e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi428g00044 SET 1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi428g00044 K11433 - gmx:100786871 231.876