Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi428g00037 ATGTTGTGGGTGGACAAGTATCGTCCCAAATCCCTCGACCAGGTTATGGTCCACATCGACATCGCTCAAAATCTCAAGAAATTGGTTACGGAACAAGATTGCCCCCATTTACTCTTCTATGGCCCATCTGGCTCTGGCAAGAAAACCCTAATCATGGCTCTTCTCCGCCAAATGTTCGGACCCGGTGCCGAAAAGGTGAAGGTGGAAAATAGGACGTGGAAAGTGGATGCCGGAAGTAGATCTATTGATTTAGAGCTGACAACATTGTCTAGTACCAATCACATTGAAATAAGTCCAAGTGATGCAGGCTTTCAGGACAGATATGTTGTTCAAGAAGTAATCAAAGAAATGGCTAAGAATAGACCCATTGATACTAAAGGGAAGAAAGGATTTAAAGTGCTAGTGCTCAATGACGTTGACAAACTCTCTAGGGAAGCTCAACATTCTCTTCGCAGAACAATGGAGAAGTACAGTGCTTATTGCAGACTAATTCTTTGCTGCAATAGTTCTTCAAGAGTCACAGAAGCAATCCGCTCCCGTTGTCTAAATATACGAATAAATGCACCAAGTGAAGAACAGATTGTGGAAGTTTTAGAGTTCATTGGTAAGAAAGAAGGGCTGCAACTTCCTTCTGATTTTGCTGCTCGCATAGCAGAGAAATCAAATCGGAATTTAAGGAGGGCCATATTGTCATTTGAGACTTGCCGTGTCCAACAGTATCCTTTCACTAGCAAACAAACAATTCCCCCAATGGACTGGGAAGAATATATTTCTGAAATTGCATCTGACATAATGAAGGAACAGAGCCCAAAAAGGTTGTTCCAAGTTCGCGGAAAGCTGTATGAGCTGCTAATCAATTGCATTCCCCCAGAGATCATTTTGAAGAGGCTTCTTTATGAGCTATTGAGGAAACTGGATGCAGAACTAAAGCATGAAGTTTGCCATTGGGCTGCATATTATGAACATAGGATGCGCCTTGGACAGAAAGCCATTTTTCACATCGAAGCTTGA 1011 0.4233 MLWVDKYRPKSLDQVMVHIDIAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGPGAEKVKVENRTWKVDAGSRSIDLELTTLSSTNHIEISPSDAGFQDRYVVQEVIKEMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNIRINAPSEEQIVEVLEFIGKKEGLQLPSDFAARIAEKSNRNLRRAILSFETCRVQQYPFTSKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi428g00037 336 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 328 - -
Sebi428g00037 336 Gene3D - 190 249 - -
Sebi428g00037 336 SUPERFAMILY post-AAA+ oligomerization domain-like 251 336 IPR008921 GO:0003677|GO:0006260
Sebi428g00037 336 Gene3D - 252 336 - -
Sebi428g00037 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 240 IPR027417 -
Sebi428g00037 336 CDD HLD_clamp_RFC 189 257 - -
Sebi428g00037 336 FunFam Replication factor C subunit 3 252 336 - -
Sebi428g00037 336 Gene3D - 1 189 IPR027417 -
Sebi428g00037 336 CDD AAA 35 190 - -
Sebi428g00037 336 Pfam DNA polymerase III, delta subunit 21 188 - -
Sebi428g00037 336 SMART AAA_5 33 192 IPR003593 GO:0016887
Sebi428g00037 336 FunFam replication factor C subunit 3 190 248 - -
Sebi428g00037 336 FunFam Replication factor C subunit 5 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi428g00037 Sebi-Chr428 699832 703838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi428g00037 1 336 Core DNA Replication Machinery Family AT5G27740 84.821 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi428g00037 K10756 - gmx:100818329 638.262