Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00081 ATGGAGAAGAAGAAGGAGATGGAGGAAGCGATTAATGGATCTTCATTGTTCCCTGCAAGTGGGTATCCATTCCCGTTTGATTTCCCCGAAGAAAAGAACACTTTAGGGTTCATGGAGTTACTGGCTGTGCAGGACTACACTACTCCTCTGCTTGATTCACCTGATCTCAAAGAGTCTACTGTTTCTGAGGTGTTGAACCACCAACCTCCCACTCCTAACTCTTCCTCCATTTCATCTGCATCCAGTGATGAGTTGAAGACTAAGAAGACAAATCAGAAGAGACAGAGAGAACCTAGATTCGCCTTCATGACGAAAAGCGAGGTGGATCATCTCGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAATAGCCCCTTCCCCAGGAAGCTATTATCGTTGCACCAGTGCTTCATTCCACTTATGGGTCGCTCATCAGGATCTCCAATCGGTGTCTCCGCCACCAACTTCAACTTAGGTTCAGCAAACTACATATCCCAATATTATAATCAGCACCATCAACAAGTCCTTGTCAATACATTGTCCTCTTTGGGTTTCCCTCCTCCTTATACTCAAGAGAGACCGCTAGAGGCAACTGCTGCATTGCTAAGGGACCATGGCCTTCTTCAAGATGTTGTTCCTTCACATATCTATGTGGAAGGAAGACCACATGATAACTCCAACACTACTGCTTCTATGTGA 711 0.4501 MEKKKEMEEAINGSSLFPASGYPFPFDFPEEKNTLGFMELLAVQDYTTPLLDSPDLKESTVSEVLNHQPPTPNSSSISSASSDELKTKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRKLLSLHQCFIPLMGRSSGSPIGVSATNFNLGSANYISQYYNQHHQQVLVNTLSSLGFPPPYTQERPLEATAALLRDHGLLQDVVPSHIYVEGRPHDNSNTTASM 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00081 236 MobiDBLite consensus disorder prediction 59 85 - -
Sebi427g00081 236 SUPERFAMILY WRKY DNA-binding domain 103 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi427g00081 236 SMART WRKY_cls 111 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi427g00081 236 Pfam WRKY DNA -binding domain 112 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi427g00081 236 Gene3D WRKY domain 98 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi427g00081 236 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 132 IPR044810 GO:0003700
Sebi427g00081 236 MobiDBLite consensus disorder prediction 59 97 - -
Sebi427g00081 236 ProSiteProfiles WRKY domain profile. 106 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00081 Sebi-Chr427 908630 909877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00081 79 223 WRKY Transcription Factor Family AT2G47260 34.286 1.05e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi427g00081 WRKY 1.2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00081 - - gmx:100784158 197.593