Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00072 ATGGATGCGAAGGATATCCTTGGATTGCCCAAAAACTCATTCCCAGTTGTAGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAGAGAAAACCAGATGGCATTTCGCGCGAGGTCTATGCGCTTACTGGTGGAATGCCACCTCTTATGCCTGCAATTGATGCCTCTCAATTGAAAAAGAAGCCTCCTTCTGACGAAAAGATCACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATAATCTTCACCTTTACCATTGGGTCCGAGTCGTCAATGGTGTTCCACCTACGGGGGACTATTCTTTTGCTAAGTATAACAAGTCTGTTGACATTATCAAGTACACGGATGAGGAGTACGACAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAGATAAACTATTTGACTTGTGTGAGAGGTTTGATCTCCGATTTATTGTAATAGCTGATAGGTTCCCGTCATCTCGGACTGTAGAGGAATTAAAGGATCGATATTATAGTGTATCGCGGGCTATATTAATTGCTAGGGCTCCGTCTTCTGGGGATGTTGCGGCAAATCCTCTTGTTAAGGAACCATATAATGTTTCACAAGAAATGGAGCGGAAACGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAGCGAAAAGATGAAGAGGTTCTCATTGAAGCAAAAAGAATAGCTGAGTTACGCATGCCTTCTAAGGCTGCGGAAGAGACTCAGTTACCTGTTGCTTCAAATGCTGGTGCAGAAGTTTCAGAGAGGGCTGTCCCTGGTGAAACTGTATCTCCAATGAATGTGCAACTTCCATCAATGGTTGTGCCAGATAATGCATCTACTCTCGCTTCTCTTCGCATTCTTCGTGTATATTTGAGAACATATGCACTTGAGCAAATGGTGCAAGCGGCGAACTCATCTGCTGGACTTCGGATTATCAAACGGGTTGATCAAACTTTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACGAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAAAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTCCAATATAAAGAGGCTGAAGGTTCATCTTTTCGTGACGGGTCATATGGTGAAACACCAGGCACACCAAAGCATTTGCATCGTGGTGGGGATCAGGATCGGACATTTATTCCAGAATCCATGAATTTTGGAGGGGAAAGGGTTGGCAAAAAGGACCACAAGCGTAAGGGACCTGGAGCTCCAGCACCATCAGGTCATAAAAGACCTAGAAAACAAAAGGCCTCAGATCTTTAG 1314 0.4444 MDAKDILGLPKNSFPVVEKKSRPPKESQRKPDGISREVYALTGGMPPLMPAIDASQLKKKPPSDEKITWQWLPFTNSARKDNLHLYHWVRVVNGVPPTGDYSFAKYNKSVDIIKYTDEEYDKYLTDPMWTKEETDKLFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRAILIARAPSSGDVAANPLVKEPYNVSQEMERKRALSMVLSQTRQQERKDEEVLIEAKRIAELRMPSKAAEETQLPVASNAGAEVSERAVPGETVSPMNVQLPSMVVPDNASTLASLRILRVYLRTYALEQMVQAANSSAGLRIIKRVDQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKHLHRGGDQDRTFIPESMNFGGERVGKKDHKRKGPGAPAPSGHKRPRKQKASDL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00072 437 SMART sant 125 174 IPR001005 -
Sebi427g00072 437 Gene3D - 98 184 - -
Sebi427g00072 437 MobiDBLite consensus disorder prediction 405 419 - -
Sebi427g00072 437 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Sebi427g00072 437 SUPERFAMILY Homeodomain-like 125 174 IPR009057 -
Sebi427g00072 437 CDD SANT_DMAP1_like 129 171 - -
Sebi427g00072 437 MobiDBLite consensus disorder prediction 366 437 - -
Sebi427g00072 437 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 426 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Sebi427g00072 437 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Sebi427g00072 437 MobiDBLite consensus disorder prediction 1 35 - -
Sebi427g00072 437 MobiDBLite consensus disorder prediction 18 33 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi427g00072 SANT_DAMP1_like 8.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00072 K11324 - gmx:100818926 776.548