Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00069 ATGGACACTGACAGTGTTCACATGATGAGAAGTTTATCAGGAGCATATGGAAGTGGAAGTGAAGAAGAGACGGAAATAACGAAAGGTCCATGGACAGAGGAGGAGGATTCTCTTCTCTTCAACTACATCACTGTCCACGGCGAAGGTCTTAAGAGAACAGGGAAAAGCTGCAGGTTAAGATGGTTGAACTACTTGCGTCCAAATGTTCGACGTGGCAATATAACACTTCAAGAACAGCTTTTGATTCTTGACCTCCATTCCCGTTGGGGCAATCGGTGGTCCAAAATAGCTCAACACTTACCGGGAAGAACAGATAACGAGATTAAAAATTATTGGAGGACGAGAGTGGTGAAGCAGGCTAAGCAACTCAAATGTGATGTTAACAGCAAACAGTTCAGAGACACTCTGCGTTTTGTATGGATGCCACGTATGCTAGAAAGGATCCAGGCTCAGGCCTCATCAGGGGATGGAACTCCTTGCCATAACCAACAACCCAACTTGTCAAACACTCAACAGCACAGTTTGTTATCAGAGGCCTCATCATCCGCCGTTGATGTCCATCAGGCTCCTTCTCTCTCTGACTCTAGTGCGTCTAATTACAGTTTAATGGATGGTGGTAGTGGTAATACTAGCTGCTCTTCATATAGTGCAGAGGAAGGTACCCTATCACAGCAGAGAAACTACATGTACATGGACATCACAGGCAACTATTTCGGTGGTGCTGACTTATGGACGGATGAAAACATATTCTTCTTGCAACAGCAGCTAGCTGATGATATTTAG 783 0.4483 MDTDSVHMMRSLSGAYGSGSEEETEITKGPWTEEEDSLLFNYITVHGEGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDTLRFVWMPRMLERIQAQASSGDGTPCHNQQPNLSNTQQHSLLSEASSSAVDVHQAPSLSDSSASNYSLMDGGSGNTSCSSYSAEEGTLSQQRNYMYMDITGNYFGGADLWTDENIFFLQQQLADDI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00069 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 65 IPR017930 -
Sebi427g00069 260 SUPERFAMILY Homeodomain-like 26 112 IPR009057 -
Sebi427g00069 260 ProSiteProfiles Myb-like domain profile. 23 116 IPR001005 -
Sebi427g00069 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 22 197 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi427g00069 260 MobiDBLite consensus disorder prediction 151 180 - -
Sebi427g00069 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Sebi427g00069 260 FunFam MYB transcription factor 75 138 - -
Sebi427g00069 260 SMART sant 27 67 IPR001005 -
Sebi427g00069 260 SMART sant 70 118 IPR001005 -
Sebi427g00069 260 Pfam Myb-like DNA-binding domain 28 65 IPR001005 -
Sebi427g00069 260 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Sebi427g00069 260 Gene3D - 27 70 - -
Sebi427g00069 260 CDD SANT 75 114 IPR001005 -
Sebi427g00069 260 Gene3D - 75 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00069 Sebi-Chr427 783076 784186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00069 21 259 MYB Transcription Factor Family AT2G47190 48.249 1.40e-76 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi427g00069 Myb_DNA-binding 7.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00069 K09422 - gmx:100819467 342.043