Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00051 ATGAGTTGTTTCAGCTGTTGTGAAGAAGATGACTTCCACAAGACTGCTGAAAGTGGAGGACCATATGTGGTGAAAAACTCAGTAAATGATGGAAATCATCATGCTTCTGAAACTGCAAAGCAGGGTGCTCAAATACTGTTAAAATTCAGGCCCATTGAAGTTCCTGAAATACCAGTGGAAGAACTCAAAGAAATTACAGATAGCTTTGGAGAAAGTTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCGTAAAAGTGGGCAGGCTGCAGCAATCAAGAAATTAGATGCCAGTAAACAGCCTGATGATGAATTTTTAGCCCAGGCACGTGTCAACATAGGCAGAAAAGGTGTTAAAGGAGCACAGCCCGGTCCTGTTCTGACATGGGCACAGAGGGTTAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAGTACTTGCATGAGAAGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTACTAATCTTCGATGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTTCATTCCACCCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGGCAATTGAATGCTAAGAGCGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCACACACTACCACGTGGGCAGCAGAGCCTGTTACTTGGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTAGGAGGAGAATACCCGCCCAAAGCTGTTGCTAAGTTTTTGAAGTTAAGAGCCATGAACAGGTATCATAATACGAGAGGAGAAATTGGGGCCGCCGTTGCTGCTCTATGTGTGCAATATGAAGCTGATTTCAGGCCAAACATGAGCATTGTAGTCAAGGCTCTTCAGCCTTTGTTGAATGCAAGACATGGACCTGCTGGTGAACACCAACTAATCCCTGCCTACATCTCTTACTATCTGTATCTGTGA 1041 0.4438 MSCFSCCEEDDFHKTAESGGPYVVKNSVNDGNHHASETAKQGAQILLKFRPIEVPEIPVEELKEITDSFGESSLIGEGSYGRVYYGVRKSGQAAAIKKLDASKQPDDEFLAQARVNIGRKGVKGAQPGPVLTWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLLLGEDKVRQCVDARLGGEYPPKAVAKFLKLRAMNRYHNTRGEIGAAVAALCVQYEADFRPNMSIVVKALQPLLNARHGPAGEHQLIPAYISYYLYL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00051 346 ProSiteProfiles Protein kinase domain profile. 22 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi427g00051 346 Gene3D Transferase(Phosphotransferase) domain 1 122 333 - -
Sebi427g00051 346 Pfam Protein tyrosine and serine/threonine kinase 130 318 IPR001245 GO:0004672|GO:0006468
Sebi427g00051 346 Gene3D Phosphorylase Kinase; domain 1 29 119 - -
Sebi427g00051 346 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 113 - -
Sebi427g00051 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Sebi427g00051 346 FunFam pto-interacting protein 1 111 330 - -
Sebi427g00051 346 SUPERFAMILY Protein kinase-like (PK-like) 50 319 IPR011009 -
Sebi427g00051 346 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Sebi427g00051 346 SMART serkin_6 69 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00051 Sebi-Chr427 567708 570349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00051 60 320 Receptor kinase-like Gene Family AT4G02010 41.584 5.37e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sebi427g00051 PK_Tyr_Ser-Thr 6.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00051 K13436 - gmx:100499642 520.005