Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00046 ATGGAAGATGAACCTTTTCTGGGGCTCGAGCGTTGCGATTTACCCTTCACCTCTTCCAAGTCCTTCAACGATGTTGTCACTTTACAAGAATCCCCACGACCACGAGTTTCAGAGATAGAATCCTGCACTGAACCCCACCGGAACCCACCATTGCCTCCCAAGAAGAAACTCAGTCGCTGCAAAACCGCTCCTGCTATGGTTACCATGCGAGACCTCAAACCAAAGGAGAATTTGATCCTAACGGGTCTTCAAGTGGGTTCTAGAGAAGGTTTCTCTGCAAGGGATTATATAGTTGATGTGGCTAAGGGTAGGATGAGGATTAGATTGAAGGTTGGTTTGGCACTTGGGGTTGTGGTGCTTTGTATTGGGATTGGGAGTTTGGTGTTGTACTTTGTGGAGGGTTTGGATTGGGTTGATTCCATTTACTTATCAGTTATGTCTGTCACAACTGTTGGGTATGGGGATAGAGCCTTCAAGACCCTTCCGGAGGCAAGAATTGATAGAAGGCATAGGAGAATGGCCAAGAAAGTGTTGCAAAGAGAAATAACTGTGGAGGATTTGATTGCTGCTGATATCAACCACACTGGTTTTATCAGTAAGTCAGAGTATGTGATCTTCAAGCTGAAAGAGATGGGTAAGATACGGGACAAGGATGTATTGCAAATTTGTGATCAATTCATGAAACTTGACCCTTCAAACTGCGGGAAGATAACATTACCTCATCTTTTGGAGGGTAGGTCATGA 744 0.4476 MEDEPFLGLERCDLPFTSSKSFNDVVTLQESPRPRVSEIESCTEPHRNPPLPPKKKLSRCKTAPAMVTMRDLKPKENLILTGLQVGSREGFSARDYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPEARIDRRHRRMAKKVLQREITVEDLIAADINHTGFISKSEYVIFKLKEMGKIRDKDVLQICDQFMKLDPSNCGKITLPHLLEGRS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00046 247 MobiDBLite consensus disorder prediction 34 57 - -
Sebi427g00046 247 ProSitePatterns EF-hand calcium-binding domain. 191 203 IPR018247 -
Sebi427g00046 247 Pfam Ion channel 119 159 IPR013099 -
Sebi427g00046 247 Gene3D - 54 176 - -
Sebi427g00046 247 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 74 177 IPR003280 GO:0005267|GO:0016020|GO:0071805
Sebi427g00046 247 SUPERFAMILY EF-hand 189 242 IPR011992 -
Sebi427g00046 247 SUPERFAMILY Voltage-gated potassium channels 101 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00046 Sebi-Chr427 528442 530295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00046 72 243 Ion Channels AT4G01840 57.921 1.19e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00046 K05389 - gmx:100780438 274.248