Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00045 ATGGCAATGTCTGTGATGAGAACAAAACAAAGCCTGGTTAAACCAGCCAAGGAGACTCCATCCACCACACTAGACCTATCAGTCATTGATAGATTACCTGTTCTAAGATGCAATGCTAGAACCTTACACGTATTCAAACATGGCCCTGAAGCTACAAGTGTCATAAAAGAAGCCTTGTCTCAAGCACTGGTTCCCTATTACCCTCTTGCAGGACGCCTCAAAGAATCCAAACCAGGGTGTCTCCAAATTGAATGCTCAGGTGATGGCGTGTGGTATGTTGAGGCATCATCTGATTGCACCCTTGACTCTGTCAATTTCTTTGATGATGTTGAGTCTATTCCATATGATCATCTTCTTCCTGATAATATTCCTGACACAGAACACATAGACCCCCTTGTGCAAATGCAGGTAACACAATTTGGTTGTGGGGGTTTTGTGATAGGCCTCATATTCTGTCATAGCATATGTGATGGTCTTGGAGCTGCACAATTTCTAAATGCTATTGGGGAGGTAGCTAGAGGTATTGAGAAACCCAGCACTGAACCAGTGTGGAACAGAGACTTCTTTCCATCTCCTCAAACACCACAAGAAGAAGTTGCTGCATTGTCAAAACTACCTCCTAGAGGTCCACCTCCAATGCCAGATTACCAGCTTCACCATGCTCACATAGACATGCCCATAGAACAAATCAACCGGCTGAAGAGAGAATTTCAACAAGTAACTGGAAGCAATTGTTCTGCTTTCGAGGTTGTAGCTGCAGGGTTTTGGAGCAGCAGAACAAAAGCCATTAATTTTGAGCCTAATACCCAATTGAAGCTTGTGTTCTTTGCAAATTGCCGTCAGTTATTGGACCCTCCTCTACCCAATGGTTTCTATGGTAATTGTTTCTTCCCAGTAACAATTACAGCTTCATGTGAGACACTTAGAAAGGCACGGATTGTTGATGTGGTGAAGCTGATCCAAGAAGCAAAGGCTAAGTTACCTATTGAGTTTGGAAAGTACTTGAAGGGAGAGCATTTGAAAGGTGATGGTGAGGACCCTTTTGCACCTCCACTTGCATATACCACACTGTTCATATCTGAGTGGGGGAGGCTGGGATTCAACCACGTGGACTACCAGTGGGGTCCACCAGTCCACGTGGTCCCTATTCAAGGGTCCAGTATTATACCAGTGGGCATTGTGGGGTCCATGCCTCTTCCAAATAAAGGGATTCGTTTGTTGACGTGGTGTGTGGAGGAGGCTCATCGAGTTCCCTTCCTTAATCACATGCATGGTGTCATGGATCAGCAATTGTTGTTATAA 1302 0.447 MAMSVMRTKQSLVKPAKETPSTTLDLSVIDRLPVLRCNARTLHVFKHGPEATSVIKEALSQALVPYYPLAGRLKESKPGCLQIECSGDGVWYVEASSDCTLDSVNFFDDVESIPYDHLLPDNIPDTEHIDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAIGEVARGIEKPSTEPVWNRDFFPSPQTPQEEVAALSKLPPRGPPPMPDYQLHHAHIDMPIEQINRLKREFQQVTGSNCSAFEVVAAGFWSSRTKAINFEPNTQLKLVFFANCRQLLDPPLPNGFYGNCFFPVTITASCETLRKARIVDVVKLIQEAKAKLPIEFGKYLKGEHLKGDGEDPFAPPLAYTTLFISEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVGIVGSMPLPNKGIRLLTWCVEEAHRVPFLNHMHGVMDQQLLL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00045 433 Gene3D - 206 420 IPR023213 -
Sebi427g00045 433 Pfam Transferase family 4 383 - -
Sebi427g00045 433 PANTHER ACYL TRANSFERASE 4 3 424 - -
Sebi427g00045 433 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00045 Sebi-Chr427 519729 521459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00045 3 389 Monolignol Biosynthesis Gene Families AT5G48930 27.427 3.98e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00045 - - gmx:100783128 720.694