Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00034 ATGGCATATTCCTCTGCTTTCCTCAGATGGTCTCAAATTGCAGCACAATTGCCTGGTAGGACTGACAATGAAATAAAGAATCTGTGGAATTCTTGGCTTAAAGAAGAAACTCAGGCAAAGAGGTATAGACCCTGTACCCATAAACCACTTTCTGAGATAGCCGCACAGAAGAAGCTAAGTGGTCTGAGTCACCTTCACAACCCAATGTTAATGCTTGCAGCTGTACAAAATCAAGCACATGAATCTTTATGTAACCAGATAAAGCCGGCCACTCATTTGGTACCAGATGCTTTAGGGGCTATATTGCCTCATTCCAAACAACAAGTACCTTCTCAAACTTCTAGTATCTTTTCCAAGGACATTCAGAAGCTAACAGCAGGCATTTGA 387 0.4186 MAYSSAFLRWSQIAAQLPGRTDNEIKNLWNSWLKEETQAKRYRPCTHKPLSEIAAQKKLSGLSHLHNPMLMLAAVQNQAHESLCNQIKPATHLVPDALGAILPHSKQQVPSQTSSIFSKDIQKLTAGI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00034 128 CDD SANT 9 33 IPR001005 -
Sebi427g00034 128 SUPERFAMILY Homeodomain-like 8 37 IPR009057 -
Sebi427g00034 128 Gene3D - 2 60 - -
Sebi427g00034 128 PANTHER F14D16.11-RELATED 9 84 - -
Sebi427g00034 128 ProSiteProfiles Myb-like domain profile. 9 33 IPR001005 -
Sebi427g00034 128 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 37 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00034 Sebi-Chr427 373986 375097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00034 9 95 MYB Transcription Factor Family AT1G57560 44.086 1.50e-15 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi427g00034 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00034 K09422 - gmx:100782199 86.6557