Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi427g00004 ATGGGCGGAGGTGGAGCGACACCTAACACAGAGGCACAGTACTCGACGGCGAAGATTTCGGTGTGGTGGGATATAGAGAACTGTCATGTCCCCAAGGGTTCGGATCCCCATGCCATCGCACAGAATATTAGTTCAGCACTGGTTCGCATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCACCGCCTCTGTACAGCACGCCCTTTCCAGCACCGGAATCTCCCTCAATCATGTTCCTGCTGGTGTGAAAGACGCAAGCGACAAGAAAATCCTTGTCGACATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTACTTACTAATTTCGGGTGATCGAGACTTCTCTAACGCTCTCCATCAACTGCGGATGAGGAGATATAATATTCTACTTGCACAACCTCAGAAAGCATCTGCACCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTCTTAGCTGGAGGACCTCCTTTAACTAATGGTGAATCACAACAACTTGGTAATAATGGCCTCTTATCATCTTCTGACACCTTACAAATTCCAGTCACAAATGCTGCTCAGATACAGCAGCAAGTGGATTCCTATTCTGAAGTTCAAAATGCCGCACATGGAAATTCAAAATTTCCAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGAAAATCAACTTGGAGAAACCCAAGTCAACCAAATGGACCCAAACCAATGAATCCACCACCAGTTGGATTTCAAGATAATCATAATAACATAAACTCTTATCGACCTGGCAGCTATAATCCAAATGTTCCTCTAAGCGGACCTGCTACAAATTTTGTTCGTGGCAATACTGATCAGTTATGGAGCAATAATGGTAATCTACAGGGCAATCATCAACATCCTTATTCCCAGCCATTAAGACCAAACAATTATCCGTTGCAACCTCCCTTTGCACCTAGTAATACATATGCTCCAAATTCCCGTAATTTTGCAACTTCACCGGTGCCACCTAGGACTGGTGGTCCCAACTTCACTACAGGACCACTCACAAATGGGCCAGATATTGGTAATCTGAACATTTCTGGATATCCAAATACTGTTCATAATCCGCGTACCACTCTGCAACGGAGTGGAGAGTTGAAACCAAATCACAACAGTAATGCGCAACGGAGTGGAGAGTTGAAACCAAATCACAACAGTAATGCTCCGCCTCCTGTAAGATCAACTGATGATAAAAATCAACCTACACCATTGGCAGCAACGGGTAATAATAACCCTCCTGCTAATGGTATGTGGGGATCTCCAGGATGTCCTAAACCTTCCGAATTTGTACAAGGCCTTATAGGAGTTGTTTTACTTGCCTTGAACTCGCTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGTTATGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAGTGTGCTATTGAACAGCAGATGGTGGTGAAACAGAATTTAGGCGCTTTGCCTTTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTTTAGGTGGGAATCCTAAGCAGCACTCAAAAGAAACATGGGACGAAATTCAAAATTTTTTAACAACTTCTGCTGGAAGATCGGCAATAATGGCTACACAGTGCAAGTATGAAGCAGGTATTGTGATAAAGAACATGTGCTTTAAAAATCATGCTTTGGGTGATGTCCTTCAGATACTGAACATGTTGATTACCCATAAAAAATGGATTGTGCATCATCAGTCTGGCTGGCAACCACTTATCATTACTCTTCCTGAGACAAACCCTGATTCAGGGGTTGTAGCTGGCACATAA 1872 0.4402 MGGGGATPNTEAQYSTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNNGLLSSSDTLQIPVTNAAQIQQQVDSYSEVQNAAHGNSKFPNGGRGFDSRYQGKSTWRNPSQPNGPKPMNPPPVGFQDNHNNINSYRPGSYNPNVPLSGPATNFVRGNTDQLWSNNGNLQGNHQHPYSQPLRPNNYPLQPPFAPSNTYAPNSRNFATSPVPPRTGGPNFTTGPLTNGPDIGNLNISGYPNTVHNPRTTLQRSGELKPNHNSNAQRSGELKPNHNSNAPPPVRSTDDKNQPTPLAATGNNNPPANGMWGSPGCPKPSEFVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDPKHRNTDVKKALECAIEQQMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQHSKETWDEIQNFLTTSAGRSAIMATQCKYEAGIVIKNMCFKNHALGDVLQILNMLITHKKWIVHHQSGWQPLIITLPETNPDSGVVAGT 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi427g00004 623 Gene3D - 10 161 - -
Sebi427g00004 623 CDD PIN_limkain_b1_N_like 18 142 - -
Sebi427g00004 623 MobiDBLite consensus disorder prediction 254 311 - -
Sebi427g00004 623 PANTHER LIMKAIN B LKAP 14 505 IPR024768 GO:0005777|GO:0010468
Sebi427g00004 623 MobiDBLite consensus disorder prediction 208 441 - -
Sebi427g00004 623 MobiDBLite consensus disorder prediction 324 434 - -
Sebi427g00004 623 Pfam OST-HTH Associated domain 560 608 IPR025677 -
Sebi427g00004 623 Pfam NYN domain 18 154 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi427g00004 Sebi-Chr427 29810 32424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi427g00004 11 198 C2H2 Transcription Factor Family AT5G61190 71.579 1.41e-84 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi427g00004 - - gmx:100794608 1066.22