Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi426g00026 ATGTCTGATAATTCTTCATTCAGTAGCTTTCTCTCTGCTGCCACTCCAAATTCCACACATAATTCCCATGCACCTCCAAAAAGCACCACAATAGCCCAACCTTGTTGTATTTGCACCCATTGCAACCATCTCCTCACCTTCAATCACCATGCTGCTCATGTAACAGAGCAAGGGACAAGCAATACAGGGTCCCATATGCAACCCCAACAAAGCACAAGGTGGAGTCCAACACCAGTTCAGTTATTAGTCCTTGAGGAATTGTATAGGCAGGGCACAAAGACACCATCAGCAGAACAAATCCAGCAAATAGCTTCACAGCTACGCCAGTTTGGGAAGATTGAAGGGAAGAATGTGTTCTATTGGTTCCAAAACCACAAGGCAAGAGAGCGGCAAAAGCGTCGCCGCAGAGAGATGGAGGAAACTGCTTCTTCTAGTCAAGGGTTGAAAGAGACAGGTTGTGGAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAGTGGACATGCAGAGGAATCTGCTGCACTGGATATATCAGAAAAGGGATCTAGTGGGTGGGCTCAATTTGAGGAGAGAGGAATACAAGTTTTGAGGAGAAGCATATCACAAGCAGAAAGGCAACAAGCTAAGTGCCAAAATATAGAAATGCCTTGTTTCACAGCTCCCATTACTATGCCACTACCACAAAGACAACAACTTTTAACCCCTCAAAATTATGATTTACAATCTGTATTCAACAGAGGAATTAGTTTCAACTATTATGATGAAGAAAATGAAGATCCAAAGACACTTGACCTTTTTCCAGTTAAGAGGGATGACCAACAAGATGGAATTTGTGTAGCTGCTGAGAGGAAATCTATGTTCTGTGGAAATGCTTCTATGGACACTGAAATCACCTCCAATCAGTTTTTTGAGTTTCTTCCTTTAAGAAACTAA 939 0.4249 MSDNSSFSSFLSAATPNSTHNSHAPPKSTTIAQPCCICTHCNHLLTFNHHAAHVTEQGTSNTGSHMQPQQSTRWSPTPVQLLVLEELYRQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEETASSSQGLKETGCGVKETKKWASTSNCSGHAEESAALDISEKGSSGWAQFEERGIQVLRRSISQAERQQAKCQNIEMPCFTAPITMPLPQRQQLLTPQNYDLQSVFNRGISFNYYDEENEDPKTLDLFPVKRDDQQDGICVAAERKSMFCGNASMDTEITSNQFFEFLPLRN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi426g00026 312 MobiDBLite consensus disorder prediction 1 26 - -
Sebi426g00026 312 MobiDBLite consensus disorder prediction 129 151 - -
Sebi426g00026 312 SMART HOX_1 69 136 IPR001356 GO:0003677
Sebi426g00026 312 Coils Coil 188 208 - -
Sebi426g00026 312 Gene3D - 63 132 - -
Sebi426g00026 312 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 55 306 IPR044555 GO:0003700|GO:0099402
Sebi426g00026 312 SUPERFAMILY Homeodomain-like 64 134 IPR009057 -
Sebi426g00026 312 Pfam Homeodomain 71 131 IPR001356 GO:0003677
Sebi426g00026 312 ProSiteProfiles 'Homeobox' domain profile. 67 132 IPR001356 GO:0003677
Sebi426g00026 312 CDD homeodomain 72 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi426g00026 Sebi-Chr426 812166 814047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi426g00026 71 186 Wox Gene Family AT3G18010 50.365 2.45e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sebi426g00026 Homeodomain 3.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi426g00026 - - gmx:102666678 418.313