Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi426g00023 ATGTACGGGATATTTGTGATCCTGCAACCTTTAGGCGACTCTGCAATCACAAGGTGGGTTTTAATGGAGAACATTCTAGGTCTTATCAGACTTCGTATCAAAAGAGGCACTAATCTCATAGCTCGCGATACTCGTACAAGTGACCCATATGTTGTTGTCACCATGGCCGAACAGAAACTGAAAACTGGTGTTGTAAAAGATACCTGTAATCCTGAGTGGAATGAAGAATTGACACTTTATCTTGGAGATGTTAATGCTCCAATACATCTGACAGTTTCTGACAAAGACACTTTCACCGTGGATGACAAAATTGGCGAAGCAGAGATAGACATAAAACCATATCTCCAGTGTGTGAAGATGGGCTTGAACGATCTCCCAGATGGCCATGTAATCAAGAAGGTTGAACCAAATAGGACTAATTGCCTTGCTGATGAGAGTAGCTGCATATGGAGAAATGGAAAAGTCATCCAAGAGATGAATTTAAGATTGAGAAATGTTAAGTCTGGGGAAGTAACCGTGGAAATTGAGTGGATTGATCTTCCAGATTCCAAGGGCTTATCAGAGGTTGAGTTTTAG 576 0.4115 MYGIFVILQPLGDSAITRWVLMENILGLIRLRIKRGTNLIARDTRTSDPYVVVTMAEQKLKTGVVKDTCNPEWNEELTLYLGDVNAPIHLTVSDKDTFTVDDKIGEAEIDIKPYLQCVKMGLNDLPDGHVIKKVEPNRTNCLADESSCIWRNGKVIQEMNLRLRNVKSGEVTVEIEWIDLPDSKGLSEVEF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi426g00023 191 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 24 184 IPR044562 -
Sebi426g00023 191 SMART C2_3c 28 123 IPR000008 -
Sebi426g00023 191 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 23 178 IPR035892 -
Sebi426g00023 191 Pfam C2 domain 28 113 IPR000008 -
Sebi426g00023 191 Gene3D C2 domain 23 189 IPR035892 -
Sebi426g00023 191 ProSiteProfiles C2 domain profile. 10 124 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi426g00023 Sebi-Chr426 750307 752104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi426g00023 59 187 C2H2 Transcription Factor Family AT1G70790 57.252 1.16e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi426g00023 - - gmx:100781585 302.367