Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi426g00004 ATGTCCTCATGGGCTTGCGTGAATCCTACTCTTCACCACACCAACCATCACCAAACTACCCTGTGGCCAGCTTCAGGACACACCCATGAGCCCTCTCAGAGTATCACTACATGGTTCCAACCGAACATGAATGGTCATTGGGTTTCTACGATTCTTGAACCGGTTCACAAATTAGGCACATTCTCGTTTCCTCATGGAGCTAGGCTCAAGGAGCCTTGGACTCAGAGAGAGCATGAGTTATTTCTGATGGGACTAATTAAGTATGGAAAAGGACATTGGACCAAAATTTCTAGACACCTTTTGTGGAACAAGACACCACAACAAGTTCAAAGCTATGCTGCTAGCTTCTTCAAGATCCTACAAGCCACATACTTATATGCATCTAAGAGAAGGAAACCCGTCAACTACTCTGCTGGTAGCCTTATGGATAGAAATAGGAATCTCATGGATGCAACTACCTCATATTCAATGCAAATGGTTCTTAATGAACCACAACGAACCCTCACTCTCTTCCCAGAGAAAACTCCTTTCTCTCAGGTTCCACCATTCGAAGAAGGTATCAGGAGTAGTAACCGTATCGATGGGTTCCAAATGCTAACAAATAGTGCAACCACTTCCATGACTGCTAGTGCTAATGGAGAAGTTGATTTAGAGCTTCGCTTAGGACGATGCTAG 675 0.443 MSSWACVNPTLHHTNHHQTTLWPASGHTHEPSQSITTWFQPNMNGHWVSTILEPVHKLGTFSFPHGARLKEPWTQREHELFLMGLIKYGKGHWTKISRHLLWNKTPQQVQSYAASFFKILQATYLYASKRRKPVNYSAGSLMDRNRNLMDATTSYSMQMVLNEPQRTLTLFPEKTPFSQVPPFEEGIRSSNRIDGFQMLTNSATTSMTASANGEVDLELRLGRC 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi426g00004 224 CDD SANT 72 113 IPR001005 -
Sebi426g00004 224 ProSiteProfiles SANT domain profile. 68 121 IPR017884 -
Sebi426g00004 224 SUPERFAMILY Homeodomain-like 72 118 IPR009057 -
Sebi426g00004 224 SMART sant 69 119 IPR001005 -
Sebi426g00004 224 ProSiteProfiles Myb-like domain profile. 70 117 IPR001005 -
Sebi426g00004 224 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 58 158 IPR043363 -
Sebi426g00004 224 Pfam Myb-like DNA-binding domain 70 112 IPR001005 -
Sebi426g00004 224 Gene3D - 71 122 - -
Sebi426g00004 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 121 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi426g00004 Sebi-Chr426 154020 154892 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi426g00004 Myb_DNA-binding 7.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi426g00004 - - gmx:102663307 234.572