Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi425g00004 ATGAATGCCAACTGTGATCTTAAGATTGGAGATTTTGGTCTAGCTAGAACTACATCTGAAACTGATTTCATGACTGAGTACGTGGTTACTCGATGGTACCGCGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCAGCCATTGATATATGGTCTGTTGGTTGCATCCTCGGTGAAATCGTGACAAGACAACCCCTATTTCCTGGGAAAGATTATGTTCATCAGCTCAGATTGATCACAGAGCTCATAGGTTCACCTGATGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAGACAGCTTCCACAATATCCGAGGCAACAATTTGCTGCTAGATTTCCCAACATGTCTCCTGGTGCAATTGATTTGTTAGAGAGGATGCTTATCTTTGATCCAAACAGGCGCATTACAGTTGATGAGGCTCTGTGCCACCCATACTTGGCACCTCTCCATGATATTAATGAGGAACCTGTTTGCCCTAGACCTTTTAGTTTTGATTTTGAGCAACCTTCTTTCACTGAAGAAGACATCAAGGAACTCATCTGGAGGGAATCTGTGATGTTCAATCCCGATCCACCTATTTATTGA 606 0.4224 MNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIVTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPRQQFAARFPNMSPGAIDLLERMLIFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPSFTEEDIKELIWRESVMFNPDPPIY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi425g00004 201 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
Sebi425g00004 201 Pfam Protein kinase domain 4 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi425g00004 201 FunFam Mitogen-activated protein kinase 1 171 - -
Sebi425g00004 201 SUPERFAMILY Protein kinase-like (PK-like) 2 160 IPR011009 -
Sebi425g00004 201 SMART serkin_6 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi425g00004 201 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 154 - -
Sebi425g00004 201 Gene3D Phosphorylase Kinase; domain 1 181 190 - -
Sebi425g00004 201 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi425g00004 Sebi-Chr425 68524 71591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi425g00004 1 200 MAP Kinase Gene Family AT4G01370 87.500 1.88e-134 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi425g00004 Pkinase 7.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi425g00004 K20600 - gmx:100801808 402.519