Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi423g00068 ATGTCGTGGCAAACCTACGTCGATGACCACCTTCTCTGCGACATCGAAGGAAATCGCCTGACTTCTGCTGCTATCCTCGGCCAAGACGGCAACGTTTGGGCTCAGAGTTCCAATTTCCCTCAGTTCAAACCTGAGGAAATAACTGCTATCATGAATGACTTCAATGAGCCTGGATCGCTTGCTCCAACTGGATTGTATCTTGGTGGCACAAAATATATGGTGATCCAAGGTGAGCCGGGAGCTGTCATTCGAGGGAAGAAGGGTCCTGGTGGTGTTACTGTCAAGAAGACCAATCTGGCCTTGGTCATTGGCATTTATGATGAACCAATGACTCCGGGTCAGTGCAACATGGTAGTTGAAAGGCTTGGTGATTATCTTATTGAACAGGCTCTCTAA 396 0.4798 MSWQTYVDDHLLCDIEGNRLTSAAILGQDGNVWAQSSNFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMVVERLGDYLIEQAL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi423g00068 131 Gene3D Dynein light chain 2a, cytoplasmic 2 131 - -
Sebi423g00068 131 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Profilin signature 100 113 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Profilin signature 113 130 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Sebi423g00068 131 PANTHER PROFILIN 1 130 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 104 117 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 117 130 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Sebi423g00068 131 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Sebi423g00068 131 FunFam Profilin 1 131 - -
Sebi423g00068 131 Pfam Profilin 1 129 IPR005455 GO:0003779
Sebi423g00068 131 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Sebi423g00068 131 CDD PROF 2 129 IPR005455 GO:0003779
Sebi423g00068 131 SMART prof_2 1 131 IPR005455 GO:0003779
Sebi423g00068 131 SUPERFAMILY Profilin (actin-binding protein) 2 129 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi423g00068 Sebi-Chr423 811257 812868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi423g00068 1 131 Cytoskeleton Gene Families AT2G19760 79.389 1.65e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi423g00068 K05759 - rcu:8265128 249.98