Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi423g00055 ATGGAAGAACCTTTGGAGGATGGGCAACTCGAACGAGTCGACTCCGAGTTGACGTCCACCAGCACTGGTTCGGGCATTTCCTCCACACTCAACAGCTCAGACGATTTTCGTAACATCAGCAGCTCCGGCGACATTTCCTCCATCAGCAGCGGCTCAGGCGAGATTCCGGCCGTCGCGGTCAACCACGCGGTTCTTACGCCTCCGCTGCCTGCCGCATCGACGGCGGTGAGGGAGAAGTGCGTGGGAAGGAGTAACAAGGGACTGAGTTGGGGGCATACCTCGGTGATTGGGAGGCGGAAAGAGATGGAGGACGCCGTCGCCGTTATCCCAGGATTCATGTCCCGCACGTGCGATCACATCGGCGGTTGTACGGCTCCCGGTTCCAGATCCTCCGGCGAAATCGCTCCCGTTCATTTTTTCGGTGTGTACGACGGCCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCCAGAAGGATGCACGATGTTATAGCAGAAGAGTGGGACCGAGAAATTGCAGGTGGCGCTGAATGGAGGAGAAGGTGGGAAGCCGTATTTGCTAATGGCTTTGAGAGGACTGACAATGAAATCTTATCAGACGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCCGTGGTGGTTCTATCTTGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTTGTTCTTTGCCGCAAGACTCAAACAATCCCCTTGACAGTGGATCAGAAGCCTGATAGACAAGATGAACTCATGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGAGATCGGTACTTGAGACCATGGATTATTCCGGTGCCGGAGATAACTTTTACAGCAAGAACGGACGAGGATGAGTGCTTAATTTTAGCAAGTGATGGACTGTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCGCGCCACATTCTAAGAAGGCGCCGCAGAACCTTATCAATGGAGGAAACATCTCCAGCACAAATTGTTGCTGATAGCCTGACTGAAATTGCATATGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTATTGATCTGAAATCAAAGAGAAAACGTCAGCCAAGGCCTCCTTAG 1158 0.5078 MEEPLEDGQLERVDSELTSTSTGSGISSTLNSSDDFRNISSSGDISSISSGSGEIPAVAVNHAVLTPPLPAASTAVREKCVGRSNKGLSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHIGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCARRMHDVIAEEWDREIAGGAEWRRRWEAVFANGFERTDNEILSDAVAPEMVGSTASVVVLSCCQIITSNCGDSRVVLCRKTQTIPLTVDQKPDRQDELMRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRTLSMEETSPAQIVADSLTEIAYGRNSKDNISIIVIDLKSKRKRQPRPP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi423g00055 385 CDD PP2Cc 91 374 IPR001932 -
Sebi423g00055 385 ProSiteProfiles PPM-type phosphatase domain profile. 89 374 IPR001932 -
Sebi423g00055 385 MobiDBLite consensus disorder prediction 1 33 - -
Sebi423g00055 385 Pfam Protein phosphatase 2C 97 367 IPR001932 -
Sebi423g00055 385 SMART PP2C_4 79 372 IPR001932 -
Sebi423g00055 385 SUPERFAMILY PP2C-like 82 375 IPR036457 -
Sebi423g00055 385 MobiDBLite consensus disorder prediction 14 33 - -
Sebi423g00055 385 Gene3D - 79 383 IPR036457 -
Sebi423g00055 385 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
Sebi423g00055 385 FunFam Protein phosphatase 2C 51 82 382 - -
Sebi423g00055 385 PANTHER PROTEIN PHOSPHATASE 70 374 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi423g00055 Sebi-Chr423 652052 658238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi423g00055 90 384 PP2C-type Phosphatase Gene Family AT4G26080 50.476 5.22e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi423g00055 K14497 - gmx:100793293 629.787