Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi423g00030 ATGTCTGTGCCATTGGAACACGGGTATGGTGGCTTGGCAGAGGTTCCTTCAATGGAAAGCTCTGACAAGTTTACACAGAGGACAAGCATTGGGTTGAACCTCAAGGCTACTGAGCTGAGGCTTGGTTTGCCAGGGTCTGAGTCACCAGAGAGGGATGGTGTGGAGGACAAGAATGGATTCTCAGCCCCACTAGGCATGCTCAAGAGTTTGGTGTCTGGGGCCAAGAGGGGTTTCTCGGACGCCATTGATGGAGGTTCTGGGAAGTGGGTTCTCTCTGGGAATGGTGGATCTGAGGTGGGTTTGGGTAAAGATGGAAGCTTGTTCTCTCCCAGGGGTGGTAGTAGTGCTGCCAACTCTCTGGCTCTCGCTGCGCCTGACTGCACCAACCAACAAACGCCTTTGGCTGCCAAAGAAAGTGTTTCACAGTCTCCAAAGCCATTGCATGAGAAGAAACCCCAGATTTCTGCTCCTGCTGCAAAGGCGCAAGTTGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCTATGGCTACTCAGGCTCAGAAGAATGATGCTGATGCAGAAGCCAAGTCTGGATGCCTTTATGTGAAAGTCAGCATGGAAGGTGCCCCATACTTGAGGAAAGTGGATCTGAATAGTTTTAGCACTTACAGGGAACTTTCTTCAGCACTTGAGAAGATGTTTAGTTGTTTTACCATCAGTCAATGTGGCTCTTATGGGGTTTCTAATCGAGAAAATTTAACTGAAAGTAGATTGATGGATCTCCTTCATGGTTCAGAATATGTGCTTACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCCTGGGAGATGTTCATTGACTCTTGCAAGAGGCTGAGGATAATGAAGAGTTCTGAAGCAATTGGGCTAGCACCTAGAGCCATGGAAAAGTGCAAAAGTCGCAACTAG 945 0.4825 MSVPLEHGYGGLAEVPSMESSDKFTQRTSIGLNLKATELRLGLPGSESPERDGVEDKNGFSAPLGMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEVGLGKDGSLFSPRGGSSAANSLALAAPDCTNQQTPLAAKESVSQSPKPLHEKKPQISAPAAKAQVVGWPPIRSFRKNSMATQAQKNDADAEAKSGCLYVKVSMEGAPYLRKVDLNSFSTYRELSSALEKMFSCFTISQCGSYGVSNRENLTESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSEAIGLAPRAMEKCKSRN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi423g00030 314 MobiDBLite consensus disorder prediction 131 158 - -
Sebi423g00030 314 MobiDBLite consensus disorder prediction 1 26 - -
Sebi423g00030 314 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 32 301 IPR003311 GO:0005634|GO:0006355
Sebi423g00030 314 FunFam Auxin-responsive protein 189 306 - -
Sebi423g00030 314 MobiDBLite consensus disorder prediction 41 60 - -
Sebi423g00030 314 Gene3D - 188 307 - -
Sebi423g00030 314 ProSiteProfiles PB1 domain profile. 194 296 IPR000270 GO:0005515
Sebi423g00030 314 Pfam AUX/IAA family 37 305 IPR033389 -
Sebi423g00030 314 SUPERFAMILY CAD & PB1 domains 191 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi423g00030 Sebi-Chr423 395551 398104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi423g00030 99 299 B3 DNA Binding Superfamily AT3G61830 28.571 2.13e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sebi423g00030 AUX_IAA 2.5e-88 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi423g00030 K14484 - gmx:100803754 474.937