Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi423g00025 ATGTGTAAGAACTGGGAGGAACAAATGCTAATTATTAGTGATCAGTCTCCTCTTGTTGATGTTAAGCAAGAAATTAAAAGCTGTGTATATGGACATGGTGGTGGTGGAAATCAAGAATTTCAGGGATCAGCTAAGCCTAACCCCACCTGGTCTCTTCCTCCTGCTGCTAATTCTTCCTCCAACAACTCATCATCATCATCATGTGTTACAAGCAGCAGCGTGTTGGATTTCTCTAACAATAAAACCGAAACCAGGCCTTCTCCATCAGATCTATCTTCTGAGTGCAATAGCAGTAGTGGAGGTGGTGGGGCATTGAAGAAAGCTAGGGTTCAACCGTCTACAACCCAGTCCACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACAGCCCTTCATCAACTCGTTTCCCCATTCGGGAAGACTGACACAGCATCTGTCTTATTAGAAGCTATTGGCTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGGGCAGTGGATCAGGAAACATGAGGCATCAACAATCTGTTCAAGGAGAGAAGAATAGTATATTCCCTGAAGACCCCGGTCAGCTGCTGAATGAAAACAGTTTGAAGAGGAAAGCAGCTAGTGAGCAGGATTGTGAAGAAGAAGAGAAGAAGGACCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCTGACTATTGGGCCCCTGCTTTTGGAGGAGCATTTCGGTAG 774 0.4509 MCKNWEEQMLIISDQSPLVDVKQEIKSCVYGHGGGGNQEFQGSAKPNPTWSLPPAANSSSNNSSSSSCVTSSSVLDFSNNKTETRPSPSDLSSECNSSSGGGGALKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSGNMRHQQSVQGEKNSIFPEDPGQLLNENSLKRKAASEQDCEEEEKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGAFR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi423g00025 257 CDD bHLH_AtbHLH_like 118 167 IPR045239 -
Sebi423g00025 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 159 IPR011598 GO:0046983
Sebi423g00025 257 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 50 239 - -
Sebi423g00025 257 FunFam transcription factor bHLH68 isoform X1 117 170 - -
Sebi423g00025 257 MobiDBLite consensus disorder prediction 40 100 - -
Sebi423g00025 257 MobiDBLite consensus disorder prediction 35 122 - -
Sebi423g00025 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 170 IPR036638 GO:0046983
Sebi423g00025 257 Coils Coil 201 226 - -
Sebi423g00025 257 Gene3D - 116 170 IPR036638 GO:0046983
Sebi423g00025 257 MobiDBLite consensus disorder prediction 177 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi423g00025 Sebi-Chr423 319987 322587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi423g00025 2 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 54.369 1.09e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi423g00025 - - gmx:100785156 347.051