LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi423g00018	ATGATACTGTTGGTGGGGACTGATTATTTAAGGGCATATGTTTCAGTGGGACAAAACAAGTATTATTTTTGTGTGCTGGAGGCAAACTCTGAGGTTCAAGAGGGCAAGACCATGAAATACAGGAGGACTTATTCTCAGAAAATGAAGGACAAGATCAAAATCCAGAATACAACTGAAAACTTAGAAACATCCTTGATAAATAGAAGATACAAAGAAGGCAAGATCCTAAAAGGATCCAGTGAAAACCTCACTGATCCATCATTTCTGCACCCCATACAGGTCTCTAGAGGGGACCAAAGTTTGAACAACATGATTGATTCATGGTCTAGCAATCTTATGTATGATGGAAGGTCTAAAGATACTGCAAAAAGTTTGTTAAAAGGAGTTCTTAATATGCAAGATTCTCTAATCATGCTTGGCAAGTTGCAAGAGGCTTCACAACATACAGCTCGTTTCAAGAGAAAACATACTGAGAAACCTAAAAGAGATAAGATTGATGCAAAGATGATTGGTAGAATTCATGCCAATCAATTTAGTGAACAAAGTAATCCAAAGAGATTTCAAAAAGCTCAGCCTTCTGCTGATGGTTCTTCAAGTAATTTAATTAAGGAGAGTTTGATTAGGCAAAATATGTTTCCAAGCACAACTCCTTCTATAAGCCCAAGCCAATCTTCTGGGGTTATCACTCACAGGTTTGCTGGTCCTTCTTTCTCACTAACACCTTCAAAAGGACCCAATCTAGTTGCCAAGTTGATGGGTTTAGAAGAAGTCCCCTCAAAATCATTTCCTGCTATAAAGCAGAAACCTTTGGATGGTGAAAAGATTATGCTGAAGGTTAAAAGGAATAAATATAGAGCTGAGAAGGTTAATCAAGAACAAAAGGTCCTGAGAGAAACTTTTGACACTGTGCATCTCAAAGGACAGAATTTTGTCAAAGAGCCAAAGCTTCTGGTCCATCATTTCAGTGATCCCAATTCCAAGCAGTTTGATAATTTATCTCACATTGTACTCATGAAGCCTCAATGTACTTCATACCAGGAATCAGTAAAAACACATACCCCAGTTCCTCCTGAAGAGTTATCCATTAGAAAACTGAGAGAAGAAATAATCTCTTCCAAAACTATCAGACAAAGAAAAGGTTCTAGTTCCACCAACATGGGAAAAGAAATGGAAAAAGATGTAAGGAGACGGCTTACCAAAGAGAAAAGACCTGAATTTCTCAAAGAGGTTGTGAAACTGGATGCAAAAGAAAAATCTTCTGGTAAGGTAAAACTATATAGTCAGGTTAGTCACACATCACAGGCAAATGAGACAATTGATAAAAAATGTAAGGTACAGATCATTAGTAGAAAACTGCCAGAAAAGGATATCTCAGTGCCTAGAATTGTGGCAATACCTCAAGATCAAAGAGAAATCACCTCCACAAAATTGAGGAAGCCACCAAGTTGGTCCAGAATCGACAAAAATGAGATTTCCTTCCTAGAGAGCACAGATTCAAACACAATCTCCATCTCTAAAACAGAGTCACAAAAAATTACTAATTCCAAGGACCTTAGTATGGAGATTAAAGAATCTGATTCTGTGCTAACACGTAGAAAGAATCAGATGAAGAACCAAACTCCCAGTGCTGAGCCTGAAGCAGCTAAATCAATTGTTGAACAAATGGGGCTTGGAAAAGAGAAGAAAAGTATAGATGTTCCTGCTAAGGATGATTCTGCAGAGATTAGAATCACCACTGTACAAGCAGGTGAACTCATGATGAGGCGTGAAGCACATGCCTATGAAAATAAGAATAGAGGATGTAAGAGGAGAAAGAGTTCTTCAGGCAATGACACTATGCTGCTAAAGTCTGAACATGAAAATGATTCTATCTTTGTTAAAGAAGCTCCTGATAGCATTCCTGACAAAGAGGGAGATAAGCTAAAACATTTTCTTTTAACCAGTGAATCATTTATTGGACATGCAGAGAAGCTCTTCAATCTTGATGTGGATTGTCCTAAGATCCTACAAAAAAATGAAACTAAAGGGATAGACAATCTCAGGCTTTATTTGGAATGTGCAAATGAACTTAGTGAGTGTAAAAGCCTTCAAGAGTCACAGGTAGTGCGTTCTTTGTTGTTAACTTGTGTGGGAAACTCAAGATTACTTGTCTCTTTAAGAAGGCTGGTTGAAGAAATCTATGATGCCATTGAGAATCTGAAATTTTATAGTGAGAGTTGTGGGGAGAAACCTTTCACAGACAATCTCTTTGCAATGACAGAGAGAGATATGATGTGCAATGGACTGGTAAATGGTATATGGGAGTGGGGTTGGAGACACGGATTTTCTGAAGATGAGACTGAGCTAGTTGTAAATAAAGTAGAGAGCTTGCTTGATAAAAGAGTTGAAACCGGTTGA	2397	0.3792	MILLVGTDYLRAYVSVGQNKYYFCVLEANSEVQEGKTMKYRRTYSQKMKDKIKIQNTTENLETSLINRRYKEGKILKGSSENLTDPSFLHPIQVSRGDQSLNNMIDSWSSNLMYDGRSKDTAKSLLKGVLNMQDSLIMLGKLQEASQHTARFKRKHTEKPKRDKIDAKMIGRIHANQFSEQSNPKRFQKAQPSADGSSSNLIKESLIRQNMFPSTTPSISPSQSSGVITHRFAGPSFSLTPSKGPNLVAKLMGLEEVPSKSFPAIKQKPLDGEKIMLKVKRNKYRAEKVNQEQKVLRETFDTVHLKGQNFVKEPKLLVHHFSDPNSKQFDNLSHIVLMKPQCTSYQESVKTHTPVPPEELSIRKLREEIISSKTIRQRKGSSSTNMGKEMEKDVRRRLTKEKRPEFLKEVVKLDAKEKSSGKVKLYSQVSHTSQANETIDKKCKVQIISRKLPEKDISVPRIVAIPQDQREITSTKLRKPPSWSRIDKNEISFLESTDSNTISISKTESQKITNSKDLSMEIKESDSVLTRRKNQMKNQTPSAEPEAAKSIVEQMGLGKEKKSIDVPAKDDSAEIRITTVQAGELMMRREAHAYENKNRGCKRRKSSSGNDTMLLKSEHENDSIFVKEAPDSIPDKEGDKLKHFLLTSESFIGHAEKLFNLDVDCPKILQKNETKGIDNLRLYLECANELSECKSLQESQVVRSLLLTCVGNSRLLVSLRRLVEEIYDAIENLKFYSESCGEKPFTDNLFAMTERDMMCNGLVNGIWEWGWRHGFSEDETELVVNKVESLLDKRVETG	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi423g00018	798	MobiDBLite	consensus disorder prediction	528	547	-	-
	Sebi423g00018	798	MobiDBLite	consensus disorder prediction	374	396	-	-
	Sebi423g00018	798	Pfam	DUF761-associated sequence motif	243	262	IPR032795	-
	Sebi423g00018	798	MobiDBLite	consensus disorder prediction	175	198	-	-
	Sebi423g00018	798	PANTHER	OS01G0228800 PROTEIN-RELATED	31	789	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi423g00018	Sebi-Chr423	244996	248590	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi423g00018	77	255	TRM (TON1 Recruiting Motif) Superfamily	AT3G24630	26.570	1.54e-07	53.1