Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi423g00005 ATGAGTGATACCTCTTACTCCAGTAATAGGCAGGAGCAGGACAGCTCCTTCTACAAGATACCAACCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTCGTCGATGCCGTATCAGGGAAGACATTTGAGACAATAGACCCAAGAACAGGAGAAGTGACTGCAAGTATTAGCGAGGGAGATAAAGAAGACATTGACATTGCTGTTATGGCAGCGCGTGAGGCATTTGATTCAGGTCCATGGCCTCGCATGTCCGGTGTTGAAAGGGCAAAATTTATGATGAAATGGGCAGACTTAATTGATCAAAACAGAGAAGAACTAGCAGCATTAGAGACGATTGATACTGGAAAGCTGTACCATTCCACTATGGTTTTGGAAATTCCTGCAGCCGCAAGTACTCTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGCGAGGTTTTAAAACCAGCACGGGAGTTTCACGCTTATACACTGTTGGAACCAATTGGTGTTGTGGGACACATAATTCCCTGGAATGCCCCAACCTCCATGTTGTTTACTAAAGTTAGCCCTTCCTTAGCTGTGGGATGCACTATGGTCCTCAAGCCTGCTGAACAAGCACCTCTCTCTGCTTTGTTTTGTGCTCATCTTGCTAAACTGGTCAGCTTTACTGGTTCTGTTGAAGTAGGTCGTGAAGTAATGCAAGCTGCAGCTAGGAGTAATTTAAAACCGGTTTCACTTGAATTAGGAGGCAAATCACCTCTCATTATTTTCGATGATGCTGATATAGACAAAGCTGCTGAGCTTGCTCTCTTAGGCATCCTATTTAACAAGGGAGAAGCTTGTGTTGCAAGTTCCCGTGTGTTCGTTCATGAAGGGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGATCGTTGGGGATCCTTTTGATCCTAAAACTCAGCAAGGGCCTCAGGCCGATCGGCCAGAAGGCTGGAAGGCTGGCCGGCCAGGAGGCTTGAAGGCTAGCCAGGAAGGCTGGAAGACAGGCTGTCCAGGAAGGCTGAAAGGTCAGCCGGCTTACAGGAACCAATTTGAAAAAATTCTTTCCTATATTGAGCATGGAAAGAGAGAAGGAGCCACTCTCCTGACTGGAGGTAAAACAGTGGGCAGTAAAGGCTACTACATTGAACCAACAATTTTCTCCGATGTAAAGGTGATCAAATCTAACTCCATCAATGTATCAAATTGGGAGGATATGCTTATAGCACAGGATGAAATATTTGGCCCTGTGATGGCACTGATGAAGTTTAAGACTATTGATGAAGCAATAAAGAGTGCTAACAATACCAAATATGGCCTAGCAGCAGGCATTATGACCAAGAACTTGGATACTGCAAACACTATGTCAAGGTCCATTCGGGCAGGCACTATTTGGATCAATTGCTATTTCGCCTTAGGGAGTGACATTCCTTTTGGAGGCTATAAGATGAGTGGATTTGGAAGAGATTTGGGATTGGAAGCCCTTCACAAGTACTTACAAATTAAATCTGTTGTAACACCTATTTATAATTCTCCTTGGCTGTGA 1569 0.4417 MSDTSYSSNRQEQDSSFYKIPTIKFTKLFINGDFVDAVSGKTFETIDPRTGEVTASISEGDKEDIDIAVMAAREAFDSGPWPRMSGVERAKFMMKWADLIDQNREELAALETIDTGKLYHSTMVLEIPAAASTLRYYAGAADKIHGEVLKPAREFHAYTLLEPIGVVGHIIPWNAPTSMLFTKVSPSLAVGCTMVLKPAEQAPLSALFCAHLAKLVSFTGSVEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADIDKAAELALLGILFNKGEACVASSRVFVHEGIYDEFEKKLVEKAKAWIVGDPFDPKTQQGPQADRPEGWKAGRPGGLKASQEGWKTGCPGRLKGQPAYRNQFEKILSYIEHGKREGATLLTGGKTVGSKGYYIEPTIFSDVKVIKSNSINVSNWEDMLIAQDEIFGPVMALMKFKTIDEAIKSANNTKYGLAAGIMTKNLDTANTMSRSIRAGTIWINCYFALGSDIPFGGYKMSGFGRDLGLEALHKYLQIKSVVTPIYNSPWL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi423g00005 522 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 215 512 - -
Sebi423g00005 522 FunFam Aldehyde dehydrogenase, mitochondrial 16 216 - -
Sebi423g00005 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 246 517 IPR016163 GO:0016620
Sebi423g00005 522 Pfam Aldehyde dehydrogenase family 35 214 IPR015590 GO:0016491
Sebi423g00005 522 Pfam Aldehyde dehydrogenase family 356 512 IPR015590 GO:0016491
Sebi423g00005 522 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 242 249 IPR029510 GO:0016491
Sebi423g00005 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 11 245 IPR016162 GO:0016491
Sebi423g00005 522 FunFam Aldehyde dehydrogenase3 346 481 - -
Sebi423g00005 522 MobiDBLite consensus disorder prediction 309 342 - -
Sebi423g00005 522 FunFam Aldehyde dehydrogenase, putative 484 510 - -
Sebi423g00005 522 SUPERFAMILY ALDH-like 18 520 IPR016161 GO:0016491
Sebi423g00005 522 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 270 281 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi423g00005 Sebi-Chr423 64038 69434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi423g00005 9 522 Aldehyde Dehydrogenase Gene Family AT3G24503 59.083 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi423g00005 K12355 - gmx:100811540 741.11