Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi422g00085 ATGACGGACTCTACAACCCCACTCGTGAGCTTGAAGGTCCTTGTCTTAGCAGGAATTTTCCTCGTCATCTTGCTGTTAATAGGGCTCTTGATCTTCCTCTGCTTCCGTGGGAACCGAAGCTGCAGGAACCGCAAATTGGTAGTGAAGCACAGTTCCGGCACTATCCCTTTGGTTTCCAAGGAGATCGCGGTGGTTAAGTCCTTGGATCTCACCCCTGCCTCTGACTCTGGCCAGGCGCGGATTGAAATTGAAGAGGACTCTGATGTTGATCCGAAGAAAGAGGCGGAGATCAAGGTTGAAATTGAAAAGATAAGGAAGAGTGACGTGTCCACGACGGTGGAGGATCCTAACATAGGGTGGGGACGCTGGTATACCATGAGGGAAGTGGAGATTGCGACACGTGGATTTGCGGAAGGGAATGTGATTGGGGAAGGAGGGTATGGGGTTGTGTACAGAGGAGTTCTGCAAGATGGTTCTGTTGTGGCTGTGAAGAACCTTCTCAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTAAGGCATAAGAACTTGGTTGGTTTAGTAGGATATTGTGCTGAAGGTCCTCGAAGGATGCTTGTTTATGAATATCTTAACAACGGGAATTTGGAGCAGTGGCTGCATGGTGATGTAGGACCAGTGAGCCCCTTGACATGGGATATTCGAATGAAGATTGCCATTGGGACTGCAAAAGGGCTAGCCTATTTGCACGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCCAGTAACATTCTTTTGGATAAAAACTGGAATGCCAAAGTATCAGATTTTGGACTTGCCAAGCTCTTAGGATCTGAGAAAAGCCATGTGACTACACGTATGCTAAATGAGCGCAGTGATGTGTACAGCTTTGGAGTTCTGCTCATGGAGATAATTACAGGAAGATGCCCCATTGATTATTCAAGACCACCTGGAGAGATGAATTTGGTTGATTGGTTTAAGGCAATGGTAGCAAGTCGTCGCAGTGATGAGCTAGTTGATCCTTTGATTGAGATTAAGCCCCCTCCAAGATCTCTGAAGAGAGTTTTACTGATTTGTCTGCGTTGCATAGACTTGGATGTCATTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGTCAGATGATTTCCCCTTTCGTTCTGAGCTACGTACACTTAGGGACAAAGATCCTGCGCCTTCTCAAGCAGATGTTTCCCTTAAAGTTCCATATCTACCAAAGCATGCAGAACCCATAGAAAGATCGACACGGAGATGA 1314 0.4612 MTDSTTPLVSLKVLVLAGIFLVILLLIGLLIFLCFRGNRSCRNRKLVVKHSSGTIPLVSKEIAVVKSLDLTPASDSGQARIEIEEDSDVDPKKEAEIKVEIEKIRKSDVSTTVEDPNIGWGRWYTMREVEIATRGFAEGNVIGEGGYGVVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPRRMLVYEYLNNGNLEQWLHGDVGPVSPLTWDIRMKIAIGTAKGLAYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKSHVTTRMLNERSDVYSFGVLLMEIITGRCPIDYSRPPGEMNLVDWFKAMVASRRSDELVDPLIEIKPPPRSLKRVLLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTLRDKDPAPSQADVSLKVPYLPKHAEPIERSTRR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi422g00085 437 FunFam Probable serine/threonine-protein kinase At1g01540 116 211 - -
Sebi422g00085 437 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi422g00085 437 FunFam Putative receptor-like serine/threonine-protein kinase 212 406 - -
Sebi422g00085 437 ProSitePatterns Protein kinases ATP-binding region signature. 142 164 IPR017441 GO:0005524
Sebi422g00085 437 PANTHER OS01G0323000 PROTEIN 4 406 - -
Sebi422g00085 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Sebi422g00085 437 SUPERFAMILY Protein kinase-like (PK-like) 114 392 IPR011009 -
Sebi422g00085 437 Gene3D Phosphorylase Kinase; domain 1 93 211 - -
Sebi422g00085 437 Pfam Protein tyrosine and serine/threonine kinase 139 391 IPR001245 GO:0004672|GO:0006468
Sebi422g00085 437 Gene3D Transferase(Phosphotransferase) domain 1 212 401 - -
Sebi422g00085 437 CDD STKc_IRAK 142 392 - -
Sebi422g00085 437 ProSiteProfiles Protein kinase domain profile. 136 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi422g00085 Sebi-Chr422 936867 940240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi422g00085 83 392 Receptor kinase-like Gene Family AT4G02010 41.212 2.72e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sebi422g00085 Pkinase 4.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi422g00085 - - gmx:100305442 639.802