Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi422g00077 ATGCTTCTTTCATGTCAAAAATACAACCTTTACCTTCCTTGCTCCTCTGTCCATTACACCAACAACCCAACATCCACCATTGTCAAATGCCAAAACTCGAACGAGCAGCACCCCATTCTTCGCAAACACAACGCCAAATCCACCGCTTTTCTCCTTCATCACCTTTCCCACAAGGACAGTGACAGTGATGATGATCACCGTTCACCCAGTGACCTACAAGACCCCACACCCCACGAAGAAAAGGTGAAGCTTTTGGAGCTTTCCCTCGTGAGGAAAAGGACCCCTCAGTTCCCTGGCTCCATTTATGCTCAGTCCCCCAGCGACCCTGATGTGGGTTCTTCTCTTCCTCCTCTGAGCACTATGTTTCGATCAAGCGAGGATGAAGAGGAGGAGATGATCATGCGCGCTCTTGAGATTCGCAGGAAGGTGACTGAAGAGGTTTTCAAAGAAGCCATGCGAAAGGGAAAGTTTGGAATCACTTACACCACCAATTTGGTTAGTAGGATAACTGGTTTTATTGATTACATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCGGAATATTCTCACTCCACCTTCAATTTACGCGCCAAAACCGTCATTGAAGACTCTCAAGTTGTGTCACTTGTAAGATGGTTGAAGCATAATTCACTATCGTATCCTCAGATAGCAAAGCTCATTTTGATGACAAGAGGAAAACTTGACTTGATAAGGAATCGCGTTGACTGGTTGAAGTCAGTACATGTGAAAGGAGAGTTTATTGGGAATGCAATGTTGAAGTCTGGAGATAATATTTTGCTACGCAGCAATAAAGAGCTGGATGAGATTGTTGAGTATTTAGAGTCCAGTGGTGTTAGGAGGGATTGGATGGGTTATGTCATTAGTAGATGTCCTGAATTGTTGTCTTACAGCTCAGAAGAAGTGAAAACTCGTGTGCAGTTCTTCCTAGATATGGGTTTAGATGAGAAGGATTTTGGCACAATGGTTTTTGATTTTCCTAGAGTACTTGGTTACTATACTCTGGAAGAAATGAACCAAAAGATTAATTACTTAAAAGAATTTGGGCTTCAAAGTAAGGATGTTGGCAAATTGCTGGCATTTAGGCCACAGTTGATGGCGTGCAGCATTGATGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTATGGGATCGACCGAGATGGTATGAGGAGAATGCTTACCCTTAAACCAATGGTCTTTTGTGCTGACTTGCAGATGACTATTGTGCCAAAGGTAAAGTTTTTTCAGGACATAGGGGTTCGAAACGATGCAATTGGCAACATGCTTGTAAAGTTTCCTACTCTACTCACTTACAGCCTGGACAAGAAGATTAAGCCAGTGGTCGTATTCTTGATGACCAAGGCTGGAGTCAGTGAGAGAGATATTGGTAAGGTTGTAGCTCTTGGACCTGAGCTCTTGGGATGCAGCATAGTACATAAACTTGAAGTAAATGTAAAATACTTTTTGTCTCTTGGCATACGTCTTCGGCAATTGGGTGAAATGATTGCTGATTTCCCAATGCTGCTCAGATACAATATAGATGTCCTTCGTCCTAAGTATAGTTATTTGCGGAAAACGATGGTCCGGACCTTGCAAGATCTCATTGAGTTTCCAAGGTTTTTCAGCTATTCTCTAGATGGTCGAATTATCCCAAGACACAAAGTTCTGGTGGAGAATCAGATTAATGTTAAGCTGAGATACATGTTGGGTAGCACTGATGAAGAATTTAACAAAATGGTGAAGGCTCTAATTAGAAAACGCCAGAGATTTCAATCTGCTGTCATGAAGGAGGATCCTAGTAATCCCCAATCTGTTATTACTAAGGATATTACTACACTCGAGACATGA 1875 0.4203 MLLSCQKYNLYLPCSSVHYTNNPTSTIVKCQNSNEQHPILRKHNAKSTAFLLHHLSHKDSDSDDDHRSPSDLQDPTPHEEKVKLLELSLVRKRTPQFPGSIYAQSPSDPDVGSSLPPLSTMFRSSEDEEEEMIMRALEIRRKVTEEVFKEAMRKGKFGITYTTNLVSRITGFIDYIMIEAANLKRLPEYSHSTFNLRAKTVIEDSQVVSLVRWLKHNSLSYPQIAKLILMTRGKLDLIRNRVDWLKSVHVKGEFIGNAMLKSGDNILLRSNKELDEIVEYLESSGVRRDWMGYVISRCPELLSYSSEEVKTRVQFFLDMGLDEKDFGTMVFDFPRVLGYYTLEEMNQKINYLKEFGLQSKDVGKLLAFRPQLMACSIDEQWKPLVKYLYYYGIDRDGMRRMLTLKPMVFCADLQMTIVPKVKFFQDIGVRNDAIGNMLVKFPTLLTYSLDKKIKPVVVFLMTKAGVSERDIGKVVALGPELLGCSIVHKLEVNVKYFLSLGIRLRQLGEMIADFPMLLRYNIDVLRPKYSYLRKTMVRTLQDLIEFPRFFSYSLDGRIIPRHKVLVENQINVKLRYMLGSTDEEFNKMVKALIRKRQRFQSAVMKEDPSNPQSVITKDITTLET 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi422g00077 624 SMART mt_12 363 394 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 472 503 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 540 571 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 257 287 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 508 538 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 292 322 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 399 430 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 SMART mt_12 435 467 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 Pfam mTERF 343 585 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 Pfam mTERF 221 353 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 Gene3D Transcription termination factor 3, mitochondrial 352 599 IPR038538 -
Sebi422g00077 624 PANTHER CGI-12 PROTEIN-RELATED 262 365 IPR003690 GO:0003690|GO:0006355
Sebi422g00077 624 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi422g00077 Sebi-Chr422 849283 852364 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi422g00077 mTERF 9.8e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi422g00077 K15031 - qsa:O6P43_001902 870.152