Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi422g00074 ATGGCCTCAAGCTCTCTCAGCAAACAAAAGCCTTGTGACTCCTCTTGGACACCAAAACAGAACAAGCTGTTTGAAAAGGCACTTGCAAAATATGATAAGGACACCCCAGAAAGATGGCAGAATGTAGCCAAAGCAGTTGGTGGAAAATCTGCAGAAGAAGTTAAGAGACACTATGAAATCCTCTTGGAGGATCTCAGACACATAGAGTCTGGCCGTATTCCAATTCCCAACTACAAGTCCACAGGAAGCACCACCAATGTTGATGAAGAAGAGAGGTAA 279 0.4409 MASSSLSKQKPCDSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAVGGKSAEEVKRHYEILLEDLRHIESGRIPIPNYKSTGSTTNVDEEER 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi422g00074 92 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Sebi422g00074 92 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Sebi422g00074 92 CDD SANT 15 62 IPR001005 -
Sebi422g00074 92 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Sebi422g00074 92 MobiDBLite consensus disorder prediction 73 92 - -
Sebi422g00074 92 SMART sant 12 64 IPR001005 -
Sebi422g00074 92 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Sebi422g00074 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Sebi422g00074 92 Gene3D - 9 75 - -
Sebi422g00074 92 FunFam Transcription factor SRM1 8 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi422g00074 Sebi-Chr422 730399 730677 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi422g00074 Myb_DNA-binding 8.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi422g00074 - - gmx:100798314 177.178