Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi422g00028 ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCATCTTTGCTTCAGAACTCTGGTTCAGAGGAGGACTTGCAGGCGTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCAAATCGTGAATCAGCAAGACGATCTAGGATGAGGAAACAAAAGCACTTGGATGATCTTGTTTCCCAAGTGGCTCAGCTCAGGAAGGAGAATCAGCAAATACTCACAAGTGTTAACATCACCACACAACAGTACTTGAGTGTTGAGGCTGAAAACTCAGTGCTTAGAGCTCAAGTGGGAGAGCTAAGCCACAGGTTAGAGTCTTTGAATGAGATCATTGAGGTCTTAAATGCAAGCAGTGGGGTTTTTGGAGCAACCAACTTCATTGAGCCAGCCAATAGCTTCTTCTTCAACCCATTAAATATGTCCTATATGAACCAGCCCATTATGGCCTCTGCAGACAACATACTTCAGTGCTGA 468 0.4466 MASSSGTSSGSSLLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIIEVLNASSGVFGATNFIEPANSFFFNPLNMSYMNQPIMASADNILQC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi422g00028 155 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Sebi422g00028 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Sebi422g00028 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Sebi422g00028 155 Gene3D - 28 83 - -
Sebi422g00028 155 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Sebi422g00028 155 Coils Coil 46 73 - -
Sebi422g00028 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Sebi422g00028 155 FunFam BZIP transcription factor 28 79 - -
Sebi422g00028 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 151 - -
Sebi422g00028 155 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Sebi422g00028 155 MobiDBLite consensus disorder prediction 1 50 - -
Sebi422g00028 155 MobiDBLite consensus disorder prediction 24 50 - -
Sebi422g00028 155 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi422g00028 Sebi-Chr422 245999 246466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi422g00028 24 153 bZIP Transcription Factor Family AT4G34590 60.145 1.65e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi422g00028 bZIP_1 2.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi422g00028 K25786 - gmx:100101862 231.106