Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi422g00024 ATGAAGGACGCAGATGTGTCAAGGCAGATCCAGCAGATGATTAGGTTCATCCGCCAAGAGGCTGAGGAGAAAGCTAATGAAATTTCTGTTGCCGCAGAGGAGGAATTCAATATTGAGAAACTACAATTACTTGAAGCAGAAAAGAGAAAGATAAGACAAGAGTACGAGCGAAAAGCCAAACAAATTGACATTCGTAGAAAGATTGAATACTCCATGCAGCTGAATGCAGCAAGAATAAAGGTGCTTCAAGCACAAGATGAAGCTGTGAATTCTATGAAGGATGCTGCTAAAAAGGCTCTTTTACGTGTCTCAAGTGATAAGAAATTATACAAGAAACTCCTCAAAGACATGATTGTTCAGGGTTTACTACGTCTGAGGGAACCATCTGTGCTACTAAGATGCAGAGAGGGTGACCGAAAGCTAGTTGAGTCATTGCTAGAGGAAGCCAAAAAAGAATACTCAGAAAAAGCCAAAATGCAAGCACCAAAGATTATCCTTGATGATCGTGTTTATCTCCCACCACCTCCTAAAAACGCCGCTGTGGATTCCCATGAACCATTTTGGTATTTCCTTTTAAATCTGTTGAGTTGA 591 0.4078 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDIRRKIEYSMQLNAARIKVLQAQDEAVNSMKDAAKKALLRVSSDKKLYKKLLKDMIVQGLLRLREPSVLLRCREGDRKLVESLLEEAKKEYSEKAKMQAPKIILDDRVYLPPPPKNAAVDSHEPFWYFLLNLLS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi422g00024 196 Gene3D - 92 181 IPR038495 -
Sebi422g00024 196 SUPERFAMILY V-type ATPase subunit E-like 87 159 - -
Sebi422g00024 196 Coils Coil 38 61 - -
Sebi422g00024 196 Pfam ATP synthase (E/31 kDa) subunit 16 172 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sebi422g00024 196 Gene3D - 1 62 - -
Sebi422g00024 196 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 179 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sebi422g00024 196 Coils Coil 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi422g00024 Sebi-Chr422 188633 189853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi422g00024 1 178 Primary Pumps ATPases(2) AT4G11150 71.910 7.50e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi422g00024 K02150 - gmx:100791813 309.686