Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi422g00003 ATGGTGAGCAAAAATCCTACAGAAAAGAGGGAAGGGGCTAGCAAAGAAGTATGCCCTGATCTGCCATCAATTTCGAAGCCACTGAAAGAAAAAACTACAAAGGCAGAAAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTTCTTCTAAAGACTGTTGTTTCCTTGATGGACAAAGCTTAGATCAAGCTCCTTCTATTCTTGCCATCAAGTTCTCAAATCAAACAATGGCATCTGGAGGAAGTACAGCAGTCACTGAATCTGGCAGAGCAGCCCCAGGTAAAAGTATGAAGCAAACTTCACAAAAGAAAGTTGGTACTCCTGTTACATCATCGGTGGCTACTGATAAGAAATTTGGAGATCGTCCTTTGGAGAAAGAGAGGAAAAAAGATGCTCCTCCACCGCGAATGCAATTTGATGACAAAAACAAGGTGGAAAAGGCCAAGAGGCGTGCAGTAATGAATCAAACTGAAGCTAGAAACCGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATGGGACTCAGCTTCCTAAACTCGAATCGAAGTTTTTCCAACTTGATTCAGTGCATCCTTCTGTGCTCAAGGTTGGATTGCGTTATTTGGCTGGAGATATATCAGGGGGTAATGCTCGTTGTATTGAAATGCTTAGAGCATTGCAGGAAGCCATTATAGACTACTCCACACCACCTGAAAAAGTCCTTGTTAGGGATTTAACTGCAAAAATCAGTAGTTATGTTTCATTTTTTACTGAATGCAGACCGCTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGCCAAGTTGCCTTTAAGTCATACGGAATCTGAGGCAAAAGCAGCTCTTTGTTCTGATATTGACCAATTCATTAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTTGGACATGCTGCTACAAAGGTTAGGGATGGAGATGTTCTTCTTACATATGGATCATCTTGTGTTGTTGAGATGATTCTTTCACATGCCCATGATCTTGGGAAACAGTTCCGAGTTGTGGTGGTAGGCTCACGGCCAAAGCTTGAAAGTCAGGCCTTACTTCGTAGGCTGGTTGCCAAGGGCCTGAATTGTACATATACTCATATAAATGCCATTTCTTATATCATGCATGAGGTCACACGAGTTTTTCTGGGAGCTTCTTCCATTCTGTGTAATGGAACTGTATATTCAAGGGTTGGGACTGCATGTGTTGCAATGGTGGCACATGCATTTCGTGTTCCTGTATTAATCTGTTGTGAAGCTTATAAGTTTCATGAGAGGGTGCAACTTGATTCAATATGTTCCAATGAACTAGGTGACCCAGATGCTGTTGCCATGGTTCCTGGAAGAACGGATGTCAATTATCTACACAATTGGACTAATGAAGGCAATTTGCAGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCGGCGATTATTACAGATCATGGAATGATCCCTCCTACAAGTGTGCCCGTAATTGTACGCGAGTATGGGCGAGAGCACTTGATATAG 1551 0.4159 MVSKNPTEKREGASKEVCPDLPSISKPLKEKTTKAERRALQEAQRAAKASSKDCCFLDGQSLDQAPSILAIKFSNQTMASGGSTAVTESGRAAPGKSMKQTSQKKVGTPVTSSVATDKKFGDRPLEKERKKDAPPPRMQFDDKNKVEKAKRRAVMNQTEARNRVELFQHLPQYEHGTQLPKLESKFFQLDSVHPSVLKVGLRYLAGDISGGNARCIEMLRALQEAIIDYSTPPEKVLVRDLTAKISSYVSFFTECRPLSISMGNAIRFVKSRIAKLPLSHTESEAKAALCSDIDQFINEKIILADKVIVGHAATKVRDGDVLLTYGSSCVVEMILSHAHDLGKQFRVVVVGSRPKLESQALLRRLVAKGLNCTYTHINAISYIMHEVTRVFLGASSILCNGTVYSRVGTACVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELGDPDAVAMVPGRTDVNYLHNWTNEGNLQLLNLMYDATPSDYVSAIITDHGMIPPTSVPVIVREYGREHLI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi422g00003 516 MobiDBLite consensus disorder prediction 1 53 - -
Sebi422g00003 516 MobiDBLite consensus disorder prediction 27 43 - -
Sebi422g00003 516 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 7 514 - -
Sebi422g00003 516 SUPERFAMILY NagB/RpiA/CoA transferase-like 193 510 IPR037171 -
Sebi422g00003 516 Gene3D - 304 510 IPR042529 -
Sebi422g00003 516 MobiDBLite consensus disorder prediction 1 16 - -
Sebi422g00003 516 MobiDBLite consensus disorder prediction 79 140 - -
Sebi422g00003 516 MobiDBLite consensus disorder prediction 94 115 - -
Sebi422g00003 516 Pfam Initiation factor 2 subunit family 208 500 IPR000649 GO:0044237
Sebi422g00003 516 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi422g00003 Sebi-Chr422 30519 34126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi422g00003 26 516 Eukaryotic Initiation Factors Gene Family AT5G38640 70.672 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi422g00003 K03680 - gmx:100778711 808.135