Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi420g00040 ATGCCTCGCAGCTTCCAAGTTAGGGCCACTCCAGTTACTATGCTAGCCCATTTCTTATTCATAGCAATAACAACACTTGTGTTAGTTTGGCTGCTACACTTCCGTGAAGGTGTTGCTTTCAATTCTTCCAACAAAATCAAGATTTTCAATCTTCATCCACTTCTGATGATAATTGGGTTTATTTTAGTTGGTGGAGAAGCTATCATGACATACAAGTCCATCCCTGGAAAAAGAAGCTCAGGAAAGATGGTTCACCTCCTTTTGCATCTGATAGCTCTAGCAGCTGGAGTTTTAGGAATAATTGCAGTTTTCAAATCTAAGAAAGAGGCAGGTCTTGCTAATATGTATACATTACACTCTTGGCTTGGCATGTCAGCTATCTGCTCATTTGGTTTGCAGTACATTGTGGGCTTCTTCACTTATTTGTTCCCAGGTGCAGAAATGTCTACTAGAGCTACACTTATGCCATGGCACAGATTTATAGGAATGGTGATCTTCCTGCTTGCAGTTGGCACAGCTGGGATGGGTTTGGTTGAATATTTTCAGTTTCTAGGCCTTTTTCACAGCCAAGAGGCACTAATAGTGAACTTCACTGGTCTCTTACTCTTTCTCTTTGCTGTCTTTGTTAGCCTCTCTTGTGACACGATGAGTGCCATTGGTGCCTCAGTTTTGGCACACTTGTTTGGCGTCTTGGCCATCATCCTCTTGCTTGTTTGGTTGTTGCATTACCGCGATGGGATTGACTATGATTCAGACAATGGATTTCGTGTCTTCAATGTTCACCCTTTAATGATGTTCTTGGGTTTTATTTTCCTTGCTGGTGAAGCTATGATGGCATTTCTAACTATACCAAGCGAAAGGCAAATGAGGAAGTTTGTTCATATGACACTGCATTTGATTGCTATTATTCTTGGTATTGTTGGTTTGTGTGCCGTTTTCAAGTTCCACAATATGGCACACATTGCCAACGTTTACAGCCTCCATTCATGGATTGGCATTGGCACCTTCTGCTTGTTTGGTTTGCAGTGGTTTTTTGGTTTCATCACATTCATGGTTCCAGGAGCACAAGGTCCAACAAGAGCTAGAGTGCTTCCATGGCACAAAGCTGGTGGTAGAGCACTGTTGTTCATGGCAATTTGTGCTGCAGAAACAGGATTGATGGAGAAGTCTAATTTCTTAGGACTGAAGCCATATCAGAGAGAAACTCAATTGGTCAACTTCACTGGTCTTGCAATTCTCTTGTTTGGAGTTTTTGTGAACTTCTCTGTTGGTTATCGTTAG 1281 0.4192 MPRSFQVRATPVTMLAHFLFIAITTLVLVWLLHFREGVAFNSSNKIKIFNLHPLLMIIGFILVGGEAIMTYKSIPGKRSSGKMVHLLLHLIALAAGVLGIIAVFKSKKEAGLANMYTLHSWLGMSAICSFGLQYIVGFFTYLFPGAEMSTRATLMPWHRFIGMVIFLLAVGTAGMGLVEYFQFLGLFHSQEALIVNFTGLLLFLFAVFVSLSCDTMSAIGASVLAHLFGVLAIILLLVWLLHYRDGIDYDSDNGFRVFNVHPLMMFLGFIFLAGEAMMAFLTIPSERQMRKFVHMTLHLIAIILGIVGLCAVFKFHNMAHIANVYSLHSWIGIGTFCLFGLQWFFGFITFMVPGAQGPTRARVLPWHKAGGRALLFMAICAAETGLMEKSNFLGLKPYQRETQLVNFTGLAILLFGVFVNFSVGYR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi420g00040 426 Gene3D - 4 215 - -
Sebi420g00040 426 Gene3D - 216 425 - -
Sebi420g00040 426 ProSiteProfiles Cytochrome b561 domain profile. 224 424 IPR006593 -
Sebi420g00040 426 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Sebi420g00040 426 PANTHER CYTOCHROME B561-RELATED 219 423 IPR043205 GO:0016491
Sebi420g00040 426 FunFam Probable transmembrane ascorbate ferrireductase 3 219 426 - -
Sebi420g00040 426 CDD Cyt_b561_ACYB-1_like 251 394 - -
Sebi420g00040 426 SMART 561_7 260 386 IPR006593 -
Sebi420g00040 426 SMART 561_7 51 177 IPR006593 -
Sebi420g00040 426 FunFam Cytochrome b reductase 1 6 218 - -
Sebi420g00040 426 Pfam Eukaryotic cytochrome b561 260 392 IPR006593 -
Sebi420g00040 426 Pfam Eukaryotic cytochrome b561 51 179 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi420g00040 Sebi-Chr420 849490 855288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi420g00040 221 423 Chloroplast and Mitochondria Gene Families AT1G14730 54.187 2.10e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi420g00040 K08360 - gmx:100777650 331.643