Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi420g00032 ATGACTGTGGATGAAGTGGATAGTAGCTCTGAGTGGAGCAGAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAACTCATCCAGAAGATGCTTCAGATCGATGGGAGAAGATTGCAGCTGATGTACCAGGGAAGACTATAGAAGAAATTAAACAGCATTATGAGCTCTTGGTTGATGATGTTAACCAGATCGAAGCTGGTTGTGTGCCTCTACCATCTTATAATTCTTCTTCAGAGGGAAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGGCACTGTAACAGTGAGGGAACTAAGGCTTCAAGATCAGATCAGGAAAGGAGAAAGGGTATTGCTTGGACAGAGGAGGAACACAGGCAAGTTTATCATTGCTTTTATTATTTATTTTGA 393 0.4275 MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVDDVNQIEAGCVPLPSYNSSSEGSHASDEGAGKKGHCNSEGTKASRSDQERRKGIAWTEEEHRQVYHCFYYLF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi420g00032 130 SUPERFAMILY Homeodomain-like 10 65 IPR009057 -
Sebi420g00032 130 CDD SANT 11 58 IPR001005 -
Sebi420g00032 130 SMART sant 8 60 IPR001005 -
Sebi420g00032 130 FunFam Transcription factor SRM1 4 71 - -
Sebi420g00032 130 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Sebi420g00032 130 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Sebi420g00032 130 MobiDBLite consensus disorder prediction 84 113 - -
Sebi420g00032 130 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 8 122 IPR043363 -
Sebi420g00032 130 Gene3D - 5 71 - -
Sebi420g00032 130 MobiDBLite consensus disorder prediction 8 35 - -
Sebi420g00032 130 MobiDBLite consensus disorder prediction 70 113 - -
Sebi420g00032 130 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Sebi420g00032 130 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi420g00032 Sebi-Chr420 736024 736416 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi420g00032 Myb_DNA-binding 9.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi420g00032 - - gmx:100797809 219.164