Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi420g00031 ATGAGTTTGATAGTTATAGTTACATTGGGGTTGTTTCTTCTGGGATTGGACAAGTATGGAAAAGGCGACTGGCGAAGTATATCAAGGAACTTTGTGGTGACTAGAACACCAACACAAGTAGCAAGCCATGCCCAGAAATACTTCATTCGTCTGAACTCGATGAACAAAGACAGAAGGCGATCTAGCATACATGATATCACCAGTGTTAACAATGGAGACATTTCAGCACCTCAAGGACCAATAACAGGACAAACCAATGGCTCTGCTACAAATTCTGCTAGCAAATCAGGCAAACAAGCCCCTCCAGCCTCAACAGGTGCAGGAATATATGCTGCTCCCACCATAGGACAACCTATAGGAGGACCCCTTGTATCTGCTGTTGGCACCCCAGTGAATCTCCCTGCTCCTGCACACATGGCATATGGTGTTAGAGCCCCAGTTCCTCCTGGTGCAGTTGTGCCTGGTGCACCAGTGAACATGGCCCCTATGACATACCCTATGTCACATACATCTGCTCCTCACAGGTAA 528 0.4716 MSLIVIVTLGLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQTNGSATNSASKSGKQAPPASTGAGIYAAPTIGQPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPPGAVVPGAPVNMAPMTYPMSHTSAPHR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi420g00031 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 52 IPR017930 -
Sebi420g00031 175 FunFam transcription factor MYB1R1 10 53 - -
Sebi420g00031 175 MobiDBLite consensus disorder prediction 59 105 - -
Sebi420g00031 175 Pfam Myb-like DNA-binding domain 12 48 IPR001005 -
Sebi420g00031 175 NCBIfam myb-like DNA-binding domain, SHAQKYF class 11 50 IPR006447 GO:0003677
Sebi420g00031 175 MobiDBLite consensus disorder prediction 65 101 - -
Sebi420g00031 175 CDD SANT 11 48 IPR001005 -
Sebi420g00031 175 Gene3D - 10 54 - -
Sebi420g00031 175 SUPERFAMILY Homeodomain-like 11 53 IPR009057 -
Sebi420g00031 175 PANTHER TRANSCRIPTION FACTOR KUA1 11 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi420g00031 Sebi-Chr420 732071 732928 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi420g00031 Myb_DNA-binding 7.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi420g00031 - - ccaj:109792793 273.863