Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi420g00025 ATGCCAAGGGTTACATTGTTGAGTTCTATTACGCCTGGGCCTGGGAGAGTGGATTGGAAGATAAGAGTTCGTATAATAAGGTTGTGGAGACTGCCAGAGTTTAAGAATCCACTTCAGACAAGTGCCCTGGAAATGCTGTTGGTGGATGAAGAGGAGGTAAGAATTCATGCATATGTGAAAAACGCGTTGATTACAACATTTGAAGGAACTTTGAAAGAAGGCAGTGTTTATGTAATGGAAAATCTGTTAGTTGCTGAAAATAAGATGAAGTTCAAAACCACCAGCCATGCATATAAGCTCGGGTTTATGCAAAGCACTCGAGTAACTGAAATTGAGGCTGACAATATTCCATCACATTCGTTCCTCTTTGTGCCATTTCCTGATATCCTGGCGGGATCTAATGAATTTGTTCTAATGGGAAAAATGGGCATCTCTAACTCTTACAATGGTACCAAACTTCTGATTAATCCAAACATTAAGCATGATTTGGAGTATAGGGAAAGGTTCAACCAATGTGATGGTTCTCTGAGTCAGGGTGTCAGTCATACTTCTGGGGGTGATGATTTCATACAAACTCAACGAATGACAATTTCTGATATAGTTGATTGTGCTCAGGAAAAAATGGGAAAGGGATTTCTTGTTGAATTCCAAGAGTTATTTAACAAGGAATTTCTGTTCATAATTAAAATTAGCCAAGCAAATATAGATCACAATTGGCAAGGTTACACTGCGAAGAGAGTTACTGCTGATAAGGAAATGATTGGTCAATTTAAAGTGATGCATTCAATCCAGAATGATGAAGAAAATTGTAACACAGAGATTAAGTCAATCCCCTCAGCTCAAGTTGATGATAATATCATGACTGAAAATGTAATTGTTGATGATAGTCAACAAGACAGTGCAGAAGTGCTAACCCAAAAACATAATGATAAGATATCTGCTGTAGAGGAAGAAACCCCTCCAAATAAGGTGCCAGGGAAGAGAATTGCTCCTGCTATTGAGTTTTCTACTAATGCTGAGGATGAAGAAACTCAAGCTTCGAGCACCAAGGTGCCAAAGTTGTTGACTGATATTAAGAAGGAAGCAGAAGATTGA 1095 0.3854 MPRVTLLSSITPGPGRVDWKIRVRIIRLWRLPEFKNPLQTSALEMLLVDEEEVRIHAYVKNALITTFEGTLKEGSVYVMENLLVAENKMKFKTTSHAYKLGFMQSTRVTEIEADNIPSHSFLFVPFPDILAGSNEFVLMGKMGISNSYNGTKLLINPNIKHDLEYRERFNQCDGSLSQGVSHTSGGDDFIQTQRMTISDIVDCAQEKMGKGFLVEFQELFNKEFLFIIKISQANIDHNWQGYTAKRVTADKEMIGQFKVMHSIQNDEENCNTEIKSIPSAQVDDNIMTENVIVDDSQQDSAEVLTQKHNDKISAVEEETPPNKVPGKRIAPAIEFSTNAEDEETQASSTKVPKLLTDIKKEAED 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi420g00025 364 MobiDBLite consensus disorder prediction 338 352 - -
Sebi420g00025 364 Pfam Domain of unknown function DUF223 44 131 IPR003871 -
Sebi420g00025 364 SUPERFAMILY Nucleic acid-binding proteins 3 112 IPR012340 -
Sebi420g00025 364 MobiDBLite consensus disorder prediction 312 364 - -
Sebi420g00025 364 CDD RPA1_DBD_A_like 20 108 - -
Sebi420g00025 364 Gene3D - 3 110 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi420g00025 Sebi-Chr420 624794 627628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi420g00025 3 151 Core DNA Replication Machinery Family AT5G08020 26.316 2.30e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi420g00025 - - egt:105953753 122.864