Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi41g00083 ATGGAGAGAGTGAATTCATTAGGGCTACTAAGAACGAAATCGGATCAGCTGGTGGAGTCGATGGTGGCGGCGCTGAAGTCGCCGCCGTCAAGTGATCACTCAACAAATGGGCCAGCGGAAGGCAGCGCAACGCTGTCGAGGAAGTCGAGCCGGCGGTTGACGGCGGCGGCGTCACCAGGGCGTGGTGGTGGGAAGAACACACACATAAGGAAGTCAAGGAGTGCTCAAATGAAGTTTGATGTTGATGAGTTGAGTAGTGGTGCTGCTCTTAGTAGAGCATCAAGTGCCAGCTTGGGTCTCTCATTCTCCTTCACTGGTTTCACTATGCCTCCTGATCAAATTGCTGATTCCAAACCCTTCAGTGATGATGATATGATCCCGGAGGATATTGAAGCTGGTGGAACTAAGACAAAGTTTCAAACAGAACCTACTCTGCCCATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGCTCAAAGGCATGACAACAACTGAGGAGAAGGATATCCTGAATGGGATCACTGGTTCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCTGGAAGTGGAAAGACAACTCTTTTAAATCTTCTTGGAGGAAGGATAAGTCAGCCAACAATTGGTGGTTCTATCACTTACAATGACCAATCATATTCCAAGTTCCTCAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTTAAAGAGACATTGACGTATGCAGCCAGGCTAAGACTGCCAAAGACATTCACAAAAGAGCAAAAGGAAAAAAGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACCATGATTGGTGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACTGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGAATTATTTCCAATCTATAGGATGTACACCTCTTATTTCTATGAACCCTGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCGTGCCATCAGAATTGGAGGATAAAGTCCAAATGGGAAATGCAGTAGCTGAAACACATAATGGGAAACCATCACCAGCAGTTGTACATGAGTATCTGGTGGAGGCATATGAAGCTCGAGTTGCAGAAACAGAAAAGAAAAAAATAATGGTTCCTATCCCCCTTGATGAATCACTGAAGTCTAAAGTAAGTTCTAAAAGACAATGGGGAGCAAGTTGGAATGAGCAATTTTCCATATTATTTTGGAGAGGAATCAAAGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCAATCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGACTCCAAAAGATCTGCAAGATCAGGCAGGATTGCTTTTCTTCATTGCTGTCTTCTGGGGATTCTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAACAAGGAAAGAGCAGCAGATATGTACAGATTAAGTGCATACTTCCTTGCTAGAACTACAAGTGACCTTCCACTAGACTTGATATTACCAGTACTTTTTCTCATTGTGGTTTATTTCATGGCTGGTCTGAGACTGAGTGCTGCTCCTTTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTTGCTATTGGGGCTACACTCATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGTTTTTTTGTGCAGAAAGTGCCCATATTCATATCTTGGATCCGCTACATGTCATTCAACTACCACACCTACAAACTTTTGCTCAAGGTGCAATATGAACACACGACGGCTAGCCATAGCTTAATTGGGATCAAAATTGATGGTGGTTTAACAGAGGTGGCTGCTCTGATTGTCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTTTGCGGCGGATGAAACTTCAATTTGGAGCTTAA 2241 0.4333 MERVNSLGLLRTKSDQLVESMVAALKSPPSSDHSTNGPAEGSATLSRKSSRRLTAAASPGRGGGKNTHIRKSRSAQMKFDVDELSSGAALSRASSASLGLSFSFTGFTMPPDQIADSKPFSDDDMIPEDIEAGGTKTKFQTEPTLPIYLKFTDVTYKIVLKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRISQPTIGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCTPLISMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAVAETHNGKPSPAVVHEYLVEAYEARVAETEKKKIMVPIPLDESLKSKVSSKRQWGASWNEQFSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDTKTPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLIVVYFMAGLRLSAAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHTTASHSLIGIKIDGGLTEVAALIVMVFGYRFLAYLSLRRMKLQFGA 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi41g00083 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 395 IPR003439 GO:0005524
Sebi41g00083 746 CDD ABCG_EPDR 146 377 - -
Sebi41g00083 746 Pfam ABC transporter 172 323 IPR003439 GO:0005524
Sebi41g00083 746 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524|GO:0016887
Sebi41g00083 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 113 734 - -
Sebi41g00083 746 SMART AAA_5 181 372 IPR003593 GO:0016887
Sebi41g00083 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 388 IPR027417 -
Sebi41g00083 746 MobiDBLite consensus disorder prediction 27 53 - -
Sebi41g00083 746 Pfam ABC-2 type transporter 352 449 IPR043926 GO:0140359
Sebi41g00083 746 Pfam ABC-2 type transporter 489 698 IPR013525 GO:0016020|GO:0140359
Sebi41g00083 746 Gene3D - 148 390 IPR027417 -
Sebi41g00083 746 MobiDBLite consensus disorder prediction 24 75 - -
Sebi41g00083 746 FunFam ABC transporter G family member 22 159 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi41g00083 Sebi-Chr41 2691223 2698011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi41g00083 171 409 Calmodulin-binding Proteins AT2G36910 29.388 7.90e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi41g00083 K05681 - gmx:100798801 1269.99