Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi41g00049 ATGGCAGTGGCATCTTCACTTCGCTTGGCTTCACGTTTGACTAAACCGTCACCATTTCACCTCTTCGCATTCTCATTCTCTACCACCTCACCGCCACAACAACGCCCTCCTCCCATCCGAGTCGCCCTCACCGACTCAGTGGGCCGCGCCGTTTTCGCAACTCGGCCGATCCCCGCCGGCGACCTCATCCACACCGCCGAACCCGCTGTCTGCCACCCTTCTCCCTCTGCCCTCAACTCCGTCTGCTACTCCTGCCTAGCCAAGCTCCCAACTCTCTCCACACCGTTTTGCAGCCACAATTGCCACCAACGCTCTAAGGAATATTACGATGTTGAGATGAAAGCAAATTGGATGGACTTTGATAACTATTGCCGGAACCATGGGTTGAAATATCCCTTGCTGGTAAAGCGGTTGGCTTGCATGATCATATCAGGAGTTGCCAGAAGTGACAGTCTTGACATACTTCAACCTGCCAATTTGACTCATGAGATGATTTTAGAGATGGAGGAGGAATTTACCTTGCTAAGGAATGCCTTCACAAAAGCACATATTGCAGACAAACATATTGCTTTTGCACTAGTAGAAGCTGAAGCTGCTGTTGGAAATGCTGTCTATATACTTCCTTCCTTCTATAATCATGACTGCGATCCTAATACACACATTATATGGATAGATAATGCACATGCAAAATTGAAGGCCCTCCGTGACATTGACGAAGGTTGA 723 0.4869 MAVASSLRLASRLTKPSPFHLFAFSFSTTSPPQQRPPPIRVALTDSVGRAVFATRPIPAGDLIHTAEPAVCHPSPSALNSVCYSCLAKLPTLSTPFCSHNCHQRSKEYYDVEMKANWMDFDNYCRNHGLKYPLLVKRLACMIISGVARSDSLDILQPANLTHEMILEMEEEFTLLRNAFTKAHIADKHIAFALVEAEAAVGNAVYILPSFYNHDCDPNTHIIWIDNAHAKLKALRDIDEG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi41g00049 240 ProSiteProfiles SET domain profile. 37 240 IPR001214 GO:0005515
Sebi41g00049 240 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 35 240 - -
Sebi41g00049 240 Gene3D SET domain 156 240 IPR046341 -
Sebi41g00049 240 Pfam SET domain 48 240 IPR001214 GO:0005515
Sebi41g00049 240 SUPERFAMILY SET domain 36 240 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi41g00049 SET 9.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi41g00049 - - tpra:123906125 353.214